RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 DKK1O94907 266 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 SFT2D2O95562 160 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 CTRB1P17538 263 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 AMY2BP19961 511 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 DHPSP49366 369 aaPredicted RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 ZNF239Q16600 458 aaKnown RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 CTRB2Q6GPI1 263 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 OR51T1Q8NGJ9 327 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 NPRL2Q8WTW4 380 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 ROBO4Q8WZ75 1007 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 LIN37Q96GY3 246 aaPredicted RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 PGAM5Q96HS1 289 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 LYZL4Q96KX0 146 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 RNF126Q9BV68 326 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 UBE2ZQ9H832 354 aaPredicted RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 CEACAM18A8MTB9 384 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 TLX3O43711 291 aaPredicted RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 ADAP1O75689 374 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 EIF1P41567 113 aaKnown RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 STARD6P59095 220 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 SLC35A1P78382 337 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 CYCSP99999 105 aaKnown RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 FAM189A2Q15884 450 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 C1QL2Q7Z5L3 287 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 PPP1R3BQ86XI6 285 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 PNLDC1Q8NA58 520 aaKnown RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 CCDC74BQ96LY2 380 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 ST6GALNAC5Q9BVH7 336 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 PIGMQ9H3S5 423 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 ASF1BQ9NVP2 202 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 FLVCR1Q9Y5Y0 555 aa12.61□□□□□ -0.39
USP44-203ENST00000537435 CHCHD2Q9Y6H1 151 aaPredicted RBP12.61□□□□□ -0.39
USP44-203ENST00000537435 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 ATP6V1G2-DDX39BF2Z307 99 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 F8VVB4 439 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 F8VWA3 439 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 H0YIZ8 118 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 DNASE2O00115 360 aaPredicted RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 TOR1AO14656 332 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 PNLIPP16233 465 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 FPR2P25090 351 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 ADH6P28332 368 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 KISS1Q15726 138 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 ZSCAN4Q8NAM6 433 aaPredicted RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 STOML3Q8TAV4 291 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 RRNAD1Q96FB5 475 aaKnown RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 LY6G6EA0A0G2JKS1 128 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 TEX13DA0A0J9YY54 714 aaPredicted RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 LOC102725191A0A1B0GVB3 256 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 MPTX1A8MV57 137 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 F5H5K5 113 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 SDCBPO00560 298 aaPredicted RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 HTR3BO95264 441 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 PRF1P14222 555 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 CBX5P45973 191 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 ECH1Q13011 328 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 FAM122CQ6P4D5 195 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 CRIP3Q6Q6R5 217 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 PEG10Q86TG7 708 aaKnown RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 OR13G1Q8NGZ3 307 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 MAFIPQ8WZ33 124 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 RTBDNQ9BSG5 229 aaPredicted RBP12.6□□□□□ -0.39
USP44-203ENST00000537435 ZNF160Q9HCG1 818 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 U3KQA8 63 aa12.6□□□□□ -0.39
USP44-203ENST00000537435 A0A0B4J2A0 478 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 STMND1H3BQB6 276 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 WDPCPO95876 746 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 ONECUT2O95948 504 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 TPT1P13693 172 aaKnown RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 CTSSP25774 331 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 GUCA1AP43080 201 aaPredicted RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 PTGFRP43088 359 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 OR3A2P47893 321 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 SLC6A9P48067 706 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 CSNK1A1P48729 337 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 SNU13P55769 128 aaKnown RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 LSM6P62312 80 aaKnown RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 SUPT4H1P63272 117 aaKnown RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 CSNK2A1P68400 391 aaPredicted RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 GTPBP8Q8N3Z3 284 aaPredicted RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 FAM89BQ8N5H3 189 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 CSNK2A3Q8NEV1 391 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 CDC6Q99741 560 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 RAB18Q9NP72 206 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 SHPKQ9UHJ6 478 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 TP53I11O14683 189 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 IGLV3-1P01715 115 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 CELA2AP08217 269 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 SERPINA2P20848 420 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 MSR1P21757 451 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 BLVRBP30043 206 aaPredicted RBP12.59□□□□□ -0.39
USP44-203ENST00000537435 ANKRD55Q3KP44 614 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
USP44-203ENST00000537435 MRPL14Q6P1L8 145 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms