RNA–Protein interactions for RNA: ENST00000537068.5

SNHG1-204, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 629 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-204ENST00000537068 NOTCH1P46531 2555 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 TRBV4-1A0A0J9YWV2 114 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 ZNF816-ZNF321PA0A0X1KG74 233 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 RNASEK-C17orf49H0YIS7 233 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 BHLHE40O14503 412 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OR10H3O60404 316 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 SCGB1D2O95969 90 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 GYPAP02724 150 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OPN1MWP04001 364 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 LCATP04180 440 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OPN1MW2P0DN77 364 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OPN1MW3P0DN78 364 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 PSKH1P11801 424 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 DDOSTP39656 456 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 KIR2DS4P43632 304 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 GSSP48637 474 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 GSK3BP49841 420 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 SLC7A2P52569 658 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 HMGA2P52926 109 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 DBPQ10586 325 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 MALLQ13021 153 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OR8B8Q15620 311 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 TEX30Q5JUR7 227 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 GLYATL3Q5SZD4 288 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 STEAP3Q658P3 488 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 SLC35E4Q6ICL7 350 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 DRAM2Q6UX65 266 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 WDR82Q6UXN9 313 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 HACD2Q6Y1H2 254 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 KRT74Q7RTS7 529 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 PRSS45Q7RTY3 260 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 WDR86Q86TI4 376 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 CYP4Z1Q86W10 505 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 FGFRL1Q8N441 504 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 GALNT4Q8N4A0 578 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OR2AJ1Q8NGZ0 328 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 OR4K13Q8NH42 304 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 SPRYD4Q8WW59 207 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 C12orf43Q96C57 262 aaKnown RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 RCN3Q96D15 328 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 AJUBAQ96IF1 538 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 DCTN5Q9BTE1 182 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 ADAT1Q9BUB4 502 aaKnown RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 DNTTIP1Q9H147 329 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 MEGF9Q9H1U4 602 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 MMADHCQ9H3L0 296 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 RPRD1BQ9NQG5 326 aaKnown RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 C14orf119Q9NWQ9 140 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 IL20Q9NYY1 176 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 VPREB3Q9UKI3 123 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 PRPF19Q9UMS4 504 aaKnown RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 AURKCQ9UQB9 309 aa4.29□□□□□ -1.72
SNHG1-204ENST00000537068 CAB39Q9Y376 341 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-204ENST00000537068 CMYA5Q8N3K9 4069 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 A0A1B0GW55 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 G3V4G9 280 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 NDUFAB1O14561 156 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 XRCC2O43543 280 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 TIPRLO75663 272 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DIRAS1O95057 198 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 RENP00797 406 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 FBP1P09467 338 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CSF1P09603 554 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L2P0CJ85 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L3P0CJ86 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L4P0CJ87 422 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L5P0CJ88 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L6P0CJ89 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L7P0CJ90 424 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 TROVE2P10155 538 aaKnown RBP eCLIP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 COX4I1P13073 169 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SLC6A6P31641 620 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CENPAP49450 140 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 UBE2E1P51965 193 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 EFNB2P52799 333 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 ELF3P78545 371 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 FAM3AP98173 230 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 MZT1Q08AG7 82 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 ACSM1Q08AH1 577 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 TSPAN31Q12999 210 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 HERPUD1Q15011 391 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 AANATQ16613 207 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 MICBQ29980 383 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 C2orf68Q2NKX9 166 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 KLHL12Q53G59 568 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 GLYATQ6IB77 296 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 HCP5Q6MZN7 132 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 C11orf88Q6PI97 169 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 DUX4L9Q6RFH8 374 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 Q6ZPA2 131 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SLC36A1Q7Z2H8 476 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 MRPL21Q7Z2W9 205 aaKnown RBP4.28□□□□□ -1.72
SNHG1-204ENST00000537068 C1QL4Q86Z23 238 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 ZDHHC21Q8IVQ6 265 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 C11orf42Q8N5U0 333 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 FAM86B1Q8N7N1 296 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 CYB561A3Q8NBI2 242 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 SCCPDHQ8NBX0 429 aa4.28□□□□□ -1.72
SNHG1-204ENST00000537068 BEND2Q8NDZ0 799 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms