RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 NEUROG2Q9H2A3 272 aa1.51□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF302Q9NR11 478 aa1.51□□□□□ -2.17
CCDC7-208ENST00000537047 INIPQ9NRY2 104 aa1.51□□□□□ -2.17
CCDC7-208ENST00000537047 CLN6Q9NWW5 311 aa1.51□□□□□ -2.17
CCDC7-208ENST00000537047 RAB22AQ9UL26 194 aa1.51□□□□□ -2.17
CCDC7-208ENST00000537047 CCNB2O95067 398 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 CTRB1P17538 263 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 OTX1P32242 354 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-208ENST00000537047 RAB9AP51151 201 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF141Q15928 474 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 GCSAMLQ5JQS6 135 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF660Q6AZW8 331 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-208ENST00000537047 CDH26Q8IXH8 852 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 LY6G5BQ8NDX9 201 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 ACTL9Q8TC94 416 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 C18orf15Q96N68 181 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 GSDMAQ96QA5 445 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 LYARQ9NX58 379 aaKnown RBP1.5□□□□□ -2.17
CCDC7-208ENST00000537047 COL22A1Q8NFW1 1626 aaPredicted RBP1.5□□□□□ -2.17
CCDC7-208ENST00000537047 NACADO15069 1562 aa1.5□□□□□ -2.17
CCDC7-208ENST00000537047 TSPAN11A1L157 253 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 GOLGA8OA6NCC3 632 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 GOLGA8NF8WBI6 632 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-208ENST00000537047 MPHOSPH10O00566 681 aaKnown RBP1.49□□□□□ -2.17
CCDC7-208ENST00000537047 SLC16A7O60669 478 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 FSTL3O95633 263 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 THRAP10827 490 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 RAB5AP20339 215 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 HMOX2P30519 316 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 FABP6P51161 128 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 RGS8P57771 180 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-208ENST00000537047 CCDC183Q5T5S1 534 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 PRAMEF20Q5VT98 475 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 JAGN1Q8N5M9 183 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 OR4C5Q8NGB2 326 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 OR10W1Q8NGF6 305 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 RPEQ96AT9 228 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 OTUB2Q96DC9 234 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 IGF2BP2-AS1Q96M15 143 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 CSPG4P5Q96PW8 444 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 GPR21Q99679 349 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 UQCC2Q9BRT2 126 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 TBL1XR1Q9BZK7 514 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF442Q9H7R0 627 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 ANKRA2Q9H9E1 313 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 NLE1Q9NVX2 485 aaPredicted RBP1.49□□□□□ -2.17
CCDC7-208ENST00000537047 SAR1BQ9Y6B6 198 aa1.49□□□□□ -2.17
CCDC7-208ENST00000537047 RPRD2Q5VT52 1461 aaKnown RBP1.49□□□□□ -2.17
CCDC7-208ENST00000537047 GOLGA8JA6NMD2 632 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 ANKRD65E5RJM6 399 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 C15orf65H3BRN8 121 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 AQP9O43315 295 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 SYNGR2O43760 224 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 CCDC22O60826 627 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 GOLGA8HP0CJ92 632 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 BMI1P35226 326 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 MYCNOSP40205 109 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 RFC3P40938 356 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 UQCRFS1P47985 274 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 TPBGQ13641 420 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 MAPRE2Q15555 327 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 HADHQ16836 314 aaKnown RBP1.48□□□□□ -2.17
CCDC7-208ENST00000537047 C6orf99Q4VX62 202 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 ARMC12Q5T9G4 340 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 TMPPEQ6ZT21 453 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 VKORC1L1Q8N0U8 176 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 Q8NDZ9 215 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 OR4C13Q8NGP0 309 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF420Q8TAQ5 688 aaPredicted RBP1.48□□□□□ -2.17
CCDC7-208ENST00000537047 SFXN3Q9BWM7 321 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 UCK2Q9BZX2 261 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 SLC7A5P2Q9GIP4 190 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF160Q9HCG1 818 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 OR2S2Q9NQN1 319 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 HPCAL4Q9UM19 191 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 COMMD3-BMI1R4GMX3 469 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 BAHCC1Q9P281 2608 aa1.48□□□□□ -2.17
CCDC7-208ENST00000537047 UBN2Q6ZU65 1347 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 A0A0A6YYD5 115 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 SLC19A2O60779 497 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 KCNK2O95069 426 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 TRBV12-3P01733 135 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 KRT14P02533 472 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 CLTAP09496 248 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 PRSS3P35030 304 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 AP1S2P56377 157 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 C21orf59P57076 290 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 KLF3P57682 345 aaPredicted RBP1.47□□□□□ -2.17
CCDC7-208ENST00000537047 TFDP2Q14188 446 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 SLC9A3R2Q15599 337 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 HSDL1Q3SXM5 330 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 ZNF678Q5SXM1 525 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 HHATQ5VTY9 493 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 FAM104BQ5XKR9 115 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 CARD17Q5XLA6 110 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 RWDD4Q6NW29 188 aaKnown RBP1.47□□□□□ -2.17
CCDC7-208ENST00000537047 PDPNQ86YL7 162 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 OR1S1Q8NH92 325 aa1.47□□□□□ -2.17
CCDC7-208ENST00000537047 FAM81AQ8TBF8 368 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms