RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 AMY2AP04746 511 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 CD46P15529 392 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ANXA7P20073 488 aaKnown RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 SOX8P57073 446 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 GK2Q14410 553 aaPredicted RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 KISS1Q15726 138 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 LAMTOR1Q6IAA8 161 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 OR10K2Q6IF99 312 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 FAAP20Q6NZ36 180 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 FAHD2BQ6P2I3 314 aaPredicted RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 TRAPPC6BQ86SZ2 158 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 NAA40Q86UY6 237 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 FJX1Q86VR8 437 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 SULF2Q8IWU5 870 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 BPIFB2Q8N4F0 458 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ZDHHC22Q8N966 263 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 OR2T35Q8NGX2 323 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ROBO4Q8WZ75 1007 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 HAS2Q92819 552 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 RAB3CQ96E17 227 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 FAHD2AQ96GK7 314 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 GPR137Q96N19 417 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 TMPRSS13Q9BYE2 586 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 LPAR5Q9H1C0 372 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 PPA2Q9H2U2 334 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 GPR35Q9HC97 309 aa11.9□□□□□ -0.5
SMG6-203ENST00000536871 ELF5Q9UKW6 265 aaPredicted RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
SMG6-203ENST00000536871 TMEM82A0PJX8 343 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PINLYPA6NC86 204 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 RPL36A-HNRNPH2H7BZ11 118 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 NME2P1O60361 137 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 NAT2P11245 290 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 ZNF708P17019 499 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 NME2P22392 152 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PTGFRP43088 359 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 STARP49675 285 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 LHX2P50458 406 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PLGLB1Q02325 96 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 RNPS1Q15287 305 aaKnown RBP11.89□□□□□ -0.51
SMG6-203ENST00000536871 GFOD2Q3B7J2 385 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 MOGAT2Q3SYC2 334 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 CLVS2Q5SYC1 327 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 LPCAT3Q6P1A2 487 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 SLC16A14Q7RTX9 510 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 DPPA2Q7Z7J5 298 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PIP4P1Q86T03 277 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 OR8S1Q8NH09 359 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 NKD1Q969G9 470 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 POM121Q96HA1 1249 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 SEC22CQ9BRL7 303 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 TTTY12Q9BZ98 90 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 BEX1Q9HBH7 125 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 ANAPC10Q9UM13 185 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 H3BUI4 141 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 XRCC2O43543 280 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 MPIG6BO95866 241 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 SP1P08047 785 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 HIST1H1DP16402 221 aaKnown RBP11.89□□□□□ -0.51
SMG6-203ENST00000536871 ZP1P60852 638 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 RPS27AP62979 156 aaKnown RBP11.89□□□□□ -0.51
SMG6-203ENST00000536871 DHODHQ02127 395 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
SMG6-203ENST00000536871 CEACAM16Q2WEN9 425 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 NLRC3Q7RTR2 1065 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 FAM89BQ8N5H3 189 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 TNFAIP8L1Q8WVP5 186 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 LYZL4Q96KX0 146 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 C1orf147Q96MC9 270 aaPredicted RBP11.89□□□□□ -0.51
SMG6-203ENST00000536871 SCGB3A2Q96PL1 93 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 SIGLEC12Q96PQ1 595 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 OR2H1Q9GZK4 316 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PCDHB16Q9NRJ7 776 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 ZNF224Q9NZL3 707 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 KLK13Q9UKR3 277 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 PIGLQ9Y2B2 252 aa11.89□□□□□ -0.51
SMG6-203ENST00000536871 CACNA1CQ13936 2221 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 SERPINE3A8MV23 424 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 SLC22A5O76082 557 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 IFNA6P05013 189 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 TPOP07202 933 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 COX5BP10606 129 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 ZNF32P17041 273 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 CPT2P23786 658 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 CLDN18P56856 261 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 GMFBP60983 142 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 C4orf46Q504U0 113 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 ARRDC1Q8N5I2 433 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 OR4D10Q8NGI6 311 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 TM2D1Q9BX74 207 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 SELENOIQ9C0D9 397 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 CLEC4MQ9H2X3 399 aaPredicted RBP11.88□□□□□ -0.51
SMG6-203ENST00000536871 BCO1Q9HAY6 547 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 GP6Q9HCN6 339 aa11.88□□□□□ -0.51
SMG6-203ENST00000536871 IGKV1-9A0A0C4DH69 117 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 MEIS3P1A6NDR6 274 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 SMLR1H3BR10 107 aa11.87□□□□□ -0.51
SMG6-203ENST00000536871 CRTAPO75718 401 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms