RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 POMPQ9Y244 141 aa5.91□□□□□ -1.46
YBX3-206ENST00000536823 A0A0G2JMP0 313 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 A0A0X1KG70 313 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 FAM183AA6NL82 134 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 F5H0A9 414 aaPredicted RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 F5H5P2 479 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 H3BN98 237 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 TMEM178BH3BS89 294 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 J3QLI3 93 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 PLPP2O43688 288 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SBK2P0C263 348 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ANXA8P13928 327 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ANOS1P23352 680 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SLC6A9P48067 706 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SRP9P49458 86 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 PRKXP51817 358 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 BTG1P62324 171 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 CBX1P83916 185 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 BNIP1Q12981 228 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ZMYND11Q15326 602 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SNAI3Q3KNW1 292 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 KRTAP24-1Q3LI83 254 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SHQ1Q6PI26 577 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 PGAP1Q75T13 922 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ZNF771Q7L3S4 317 aaPredicted RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 MRPL21Q7Z2W9 205 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 NAA40Q86UY6 237 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 LRRC28Q86X40 367 aaPredicted RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 ERI1Q8IV48 349 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 HS3ST5Q8IZT8 346 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 RFLNBQ8N5W9 214 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 TEX29Q8N6K0 151 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 OR4M2Q8NGB6 313 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 OR6N2Q8NGY6 317 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ST7LQ8TDW4 575 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 SLAMF6Q96DU3 332 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 INTS14Q96SY0 518 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 CADM1Q9BY67 442 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 OPA3Q9H6K4 179 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 MARCH7Q9H992 704 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 ZNF556Q9HAH1 456 aa5.9□□□□□ -1.46
YBX3-206ENST00000536823 NOP16Q9Y3C1 178 aaKnown RBP5.9□□□□□ -1.46
YBX3-206ENST00000536823 PPIAL4EA0A075B759 164 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 PPIAL4CA0A0B4J2A2 164 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 C5orf63A6NC05 138 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 CD300LBA8K4G0 201 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 CEACAM18A8MTB9 384 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 A8MXK9 166 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 PRR23D1E9PI22 279 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 PPIAL4DF5H284 164 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 H0YL77 283 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 ZNF593O00488 134 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 FOXH1O75593 365 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 GLCEO94923 617 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 FSTL3O95633 263 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 HMGN1P05114 100 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 PRR23D2P0DMB1 279 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 PPIAL4FP0DN26 164 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 SLC2A1P11166 492 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 PRKACGP22612 351 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 GATA3P23771 443 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 POU1F1P28069 291 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 RBMXP38159 391 aaKnown RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 MDH2P40926 338 aaKnown RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 CD200P41217 278 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 RAD23AP54725 363 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 GRB2P62993 217 aaKnown RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 LCN2P80188 198 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 CDK5Q00535 292 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 ZNF92Q03936 586 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 SCGB2A2Q13296 93 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 EIF2B1Q14232 305 aaKnown RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 GINS1Q14691 196 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 TAF13Q15543 124 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 ZNF181Q2M3W8 571 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 GFOD2Q3B7J2 385 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 GLYATL3Q5SZD4 288 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 DCAF12L2Q5VW00 463 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 FAHD2BQ6P2I3 314 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 SHFQ7M4L6 423 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 DPY19L4Q7Z388 723 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 C1QL2Q7Z5L3 287 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 MOGAT3Q86VF5 341 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 TIGD4Q8IY51 512 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 C1orf87Q8N0U7 546 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 MUC20Q8N307 709 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 OR2AE1Q8NHA4 323 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 RNF133Q8WVZ7 376 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 SPRYD4Q8WW59 207 aaPredicted RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 DNAJC9Q8WXX5 260 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 SPSB4Q96A44 273 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 SLCO4A1Q96BD0 722 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 OTULINQ96BN8 352 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 NRBF2Q96F24 287 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 FAHD2AQ96GK7 314 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 ADAT1Q9BUB4 502 aaKnown RBP5.89□□□□□ -1.47
YBX3-206ENST00000536823 SLC22A4Q9H015 551 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 OR10A2Q9H208 303 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 TOR3AQ9H497 397 aa5.89□□□□□ -1.47
YBX3-206ENST00000536823 METTL17Q9H7H0 456 aaPredicted RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms