RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TPRKBQ9Y3C4 175 aa15.05■□□□□ -0
TNFRSF1A-209ENST00000536717 STAB1Q9NY15 2570 aa15.05■□□□□ -0
TNFRSF1A-209ENST00000536717 TRAV20A0A0B4J274 112 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 PRR32B1ATL7 298 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 PLPP2O43688 288 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 SULT1C4O75897 302 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 MYL12AP19105 171 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 MMP16P51512 607 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 ACTA2P62736 377 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 ACTG2P63267 376 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 PGAP1Q75T13 922 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 FAM220AQ7Z4H9 259 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 LHFPL3Q86UP9 236 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 JAM3Q9BX67 310 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 CHCHD3Q9NX63 227 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 UBAP1Q9NZ09 502 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 BLOC1S6Q9UL45 172 aa15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 DIMT1Q9UNQ2 313 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-209ENST00000536717 PTGES3LE9PB15 166 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 F5H5P2 479 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 HLA-DPB1P04440 258 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 ANXA2P07355 339 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 SELEP16581 610 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 DCTDP32321 178 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 MALLQ13021 153 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 GALEQ14376 348 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 RBM48Q5RL73 367 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 YIPF7Q8N8F6 280 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 OR2AE1Q8NHA4 323 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 ZNF420Q8TAQ5 688 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 MYDGFQ969H8 173 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 ALG8Q9BVK2 526 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 SP140LQ9H930 580 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 TMEM100Q9NV29 134 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 ERVK13-1Q9NX77 482 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 MRM2Q9UI43 246 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 EXOSC1Q9Y3B2 195 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 LRRC42Q9Y546 428 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 PCDHGB5Q9Y5G0 923 aa15.03■□□□□ -0
TNFRSF1A-209ENST00000536717 METTL15A6NJ78 407 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 RNF212BA8MTL3 300 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 TMEM178BH3BS89 294 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 MAGEB4O15481 346 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 SLC2A1P11166 492 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 SRP14P37108 136 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 PSMA6P60900 246 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 BTG1P62324 171 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 ZNF92Q03936 586 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 ZNF829Q3KNS6 432 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 CDONQ4KMG0 1287 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 C1orf229Q6ZS94 237 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 KCTD20Q7Z5Y7 419 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 REPIN1Q9BWE0 567 aaKnown RBP15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 FKBP14Q9NWM8 211 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 GNG8Q9UK08 70 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 N6AMT1Q9Y5N5 214 aa15.02■□□□□ -0
TNFRSF1A-209ENST00000536717 IGHV3-64DA0A0J9YX35 117 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 PNPP00491 289 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 AVPP01185 164 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 CRHBPP24387 322 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SRP9P49458 86 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZNF121P58317 390 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SRSF2Q01130 221 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 MAB21L1Q13394 359 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZMYND11Q15326 602 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 TMEM155Q4W5P6 130 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 TP53I3Q53FA7 332 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 GLYATL3Q5SZD4 288 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZNF684Q5T5D7 378 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 FAHD2BQ6P2I3 314 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 MRPL21Q7Z2W9 205 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 LRRC28Q86X40 367 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 PHC2Q8IXK0 858 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SPATA3Q8NHX4 192 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 FAHD2AQ96GK7 314 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 BRD7Q9NPI1 651 aa15.02□□□□□ -0.01
TNFRSF1A-209ENST00000536717 TMEM269A0A1B0GVZ9 245 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 CD300LBA8K4G0 201 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 LIMS3P0CW19 117 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 LIMS4P0CW20 117 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SLC35A2P78381 396 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 LIPNQ5VXI9 398 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 EGFL6Q8IUX8 553 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SYS1Q8N2H4 156 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 OR52H1Q8NGJ2 320 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 SPRYD4Q8WW59 207 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 C4orf36Q96KX1 117 aa15.01□□□□□ -0.01
TNFRSF1A-209ENST00000536717 J3QLW9 94 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 TBX1O43435 398 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 RPP14O95059 124 aaKnown RBP15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 CYB5R3P00387 301 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 CDK1P06493 297 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZNF19P17023 458 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 C21orf33P30042 268 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 PMELP40967 661 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 GATA4P43694 442 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ETV1P50549 477 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 OR12D2P58182 307 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 ZNF181Q2M3W8 571 aa15□□□□□ -0.01
TNFRSF1A-209ENST00000536717 KRTAP24-1Q3LI83 254 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms