RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 TNFRSF13BO14836 293 aaPredicted RBP11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 TMPRSS2O15393 492 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 NDUFA2O43678 99 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 TIPRLO75663 272 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 LHBP01229 141 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SFTPBP07988 381 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 MRPL3P09001 348 aaKnown RBP11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 GMFBP60983 142 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 ELF3P78545 371 aaPredicted RBP11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 APOFQ13790 326 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SLC9A3R2Q15599 337 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SNAPC1Q16533 368 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SLC35D3Q5M8T2 416 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 C9orf139Q6ZV77 190 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 C11orf53Q8IXP5 236 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 PAPD5Q8NDF8 572 aaKnown RBP11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 CSNK2A3Q8NEV1 391 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SLC25A28Q96A46 364 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 RGCCQ9H4X1 137 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 SLC25A19Q9HC21 320 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 PAPOLBQ9NRJ5 636 aaKnown RBP11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 LAMP5Q9UJQ1 280 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 LRP12Q9Y561 859 aa11.86□□□□□ -0.51
RTN3P1-201ENST00000536295 DOCK11Q5JSL3 2073 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 A0A1B0GW55 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ANXA2P2A6NMY6 339 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ZNF850A8MQ14 1090 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ZNF879B4DU55 563 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 PSMD9O00233 223 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DVL1O14640 695 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 CDIPTO14735 213 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 TOX4O94842 621 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L2P0CJ85 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L3P0CJ86 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L4P0CJ87 422 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L5P0CJ88 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L6P0CJ89 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L7P0CJ90 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 HKR1P10072 659 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 SLC2A5P22732 501 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ACKR3P25106 362 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 CFHR2P36980 270 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 CRISP1P54107 249 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 PSMA6P60900 246 aaKnown RBP11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 PRDX4Q13162 271 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DEFB112Q30KQ8 113 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 GPR157Q5UAW9 335 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 TEX36Q5VZQ5 186 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 RUSC1-AS1Q66K80 236 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 WDR82Q6UXN9 313 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 KCTD8Q6ZWB6 473 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 FGFRL1Q8N441 504 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 FTMTQ8N4E7 242 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 OR8B12Q8NGG6 310 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ST8SIA4Q92187 359 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 PIGCQ92535 297 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 TAF15Q92804 592 aaKnown RBP eCLIP11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ZDHHC16Q969W1 377 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 SEH1LQ96EE3 360 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 LYZL4Q96KX0 146 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 CCL13Q99616 98 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 MICU1Q9BPX6 476 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 RTL8AQ9BWD3 113 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 TTTY10Q9BZA0 68 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 ZMAT3Q9HA38 289 aaKnown RBP11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 RNPEPL1Q9HAU8 725 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 DUX4Q9UBX2 424 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 PCDHGB1Q9Y5G3 927 aa11.85□□□□□ -0.51
RTN3P1-201ENST00000536295 GSC2O15499 205 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 FCN3O75636 299 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 ALOX5APP20292 161 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 DAPP51397 102 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 IL5RAQ01344 420 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 FOXL1Q12952 345 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 SNCBQ16143 134 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 MICBQ29980 383 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 WDR38Q5JTN6 314 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 METTL11BQ5VVY1 283 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 PNLDC1Q8NA58 520 aaKnown RBP11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 FAM81AQ8TBF8 368 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 RPL3LQ92901 407 aaKnown RBP11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 MPC1Q9Y5U8 109 aa11.84□□□□□ -0.51
RTN3P1-201ENST00000536295 CCDC182A6NF36 153 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 M0R129 80 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 P2RY10O00398 339 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 HOXA3O43365 443 aaPredicted RBP11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 MITFO75030 526 aaPredicted RBP11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 LIPFP07098 398 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 MUC1P15941 1255 aaPredicted RBP11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 ARF6P62330 175 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 IKZF1Q13422 519 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 PTGES3Q15185 160 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms