RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF101Q8IZC7 436 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 TMEM104Q8NE00 496 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
VPS33B-202ENST00000535906 ADGRG7Q96K78 797 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF224Q9NZL3 707 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 OR14I1A6ND48 311 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 B8ZZF3 427 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 HCKP08631 526 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 NMBP08949 121 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 GNB3P16520 340 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 MPZP25189 248 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 OTX1P32242 354 aaPredicted RBP11.74□□□□□ -0.53
VPS33B-202ENST00000535906 DLSTP36957 453 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 FOXO1Q12778 655 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 DHRS2Q13268 280 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 SCGB2B2Q4G0G5 96 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 SLC22A6Q4U2R8 563 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 STEAP2Q8NFT2 490 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 OR10D3Q8NH80 312 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 LOXL4Q96JB6 756 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 PRRT1Q99946 306 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 RYDENQ9NUL5 291 aaKnown RBP11.74□□□□□ -0.53
VPS33B-202ENST00000535906 PLEK2Q9NYT0 353 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 LRFN1Q9P244 771 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 FBLN5Q9UBX5 448 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
VPS33B-202ENST00000535906 R4GN57 208 aa11.74□□□□□ -0.53
VPS33B-202ENST00000535906 MYO7BQ6PIF6 2116 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 CCDC187A0A096LP49 1063 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 SCGNO76038 276 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 GDF1P27539 372 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 CD96P40200 585 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF84P51523 738 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 MRPS34P82930 218 aaKnown RBP11.73□□□□□ -0.53
VPS33B-202ENST00000535906 RNASE10Q5GAN6 216 aaKnown RBP11.73□□□□□ -0.53
VPS33B-202ENST00000535906 FAM27BQ5VT28 67 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 CDCP2Q5VXM1 449 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 RGS7BPQ6MZT1 257 aaPredicted RBP11.73□□□□□ -0.53
VPS33B-202ENST00000535906 ALKAL2Q6UX46 152 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 TRAPPC6BQ86SZ2 158 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 OR5M8Q8NGP6 311 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 SSC4DQ8WTU2 575 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 CCDC120Q96HB5 630 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 REG4Q9BYZ8 158 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 SELENOIQ9C0D9 397 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 LPAR5Q9H1C0 372 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 CRLF2Q9HC73 371 aa11.73□□□□□ -0.53
VPS33B-202ENST00000535906 TRAV14DV4A0A0A6YYC5 116 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 A0A0A6YYD4 124 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 A0A1W2PP11 408 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CD8AP01732 235 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CSN2P05814 226 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CNR1P21554 472 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 GK2Q14410 553 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-202ENST00000535906 ZMYND11Q15326 602 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 LPCAT3Q6P1A2 487 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CD163Q86VB7 1156 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 OR10R2Q8NGX6 335 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 OR6K3Q8NGY3 331 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 NUDT16L1Q9BRJ7 211 aaKnown RBP11.72□□□□□ -0.53
VPS33B-202ENST00000535906 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 SDHAF2Q9NX18 166 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 VSIG4Q9Y279 399 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 A0A0U1RQV5 110 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 MFSD2BA6NFX1 497 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 M0R135 149 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 MPGP29372 298 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 GSK3AP49840 483 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 GFRA1P56159 465 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 SRSF4Q08170 494 aaKnown RBP11.72□□□□□ -0.53
VPS33B-202ENST00000535906 OR52W1Q6IF63 320 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CRIP3Q6Q6R5 217 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 OR2V1Q8NHB1 315 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 COQ8AQ8NI60 647 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF799Q96GE5 643 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 CYYR1Q96J86 154 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 SIGLEC12Q96PQ1 595 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 ALKBH3Q96Q83 286 aaPredicted RBP11.72□□□□□ -0.53
VPS33B-202ENST00000535906 BANF2Q9H503 90 aa11.72□□□□□ -0.53
VPS33B-202ENST00000535906 TERTO14746 1132 aaKnown RBP11.71□□□□□ -0.53
VPS33B-202ENST00000535906 SCO1O75880 301 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 NEURL1O76050 574 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 MPIG6BO95866 241 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 CD34P28906 385 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 RFC3P40938 356 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 CXADRP78310 365 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 FGL1Q08830 312 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 SLC51BQ86UW2 128 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 SLC25A42Q86VD7 318 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 ZNF845Q96IR2 970 aaPredicted RBP11.71□□□□□ -0.53
VPS33B-202ENST00000535906 CXorf58Q96LI9 332 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 GPER1Q99527 375 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 KCNK7Q9Y2U2 307 aa11.71□□□□□ -0.53
VPS33B-202ENST00000535906 MRPS18CQ9Y3D5 142 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms