RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 ANGPTL6Q8NI99 470 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 MALSU1Q96EH3 234 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 MED30Q96HR3 178 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 RAX2Q96IS3 184 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 Q96M85 177 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 RAB3IPQ96QF0 476 aaPredicted RBP6.56□□□□□ -1.36
CLIP1-206ENST00000535290 DNTTIP1Q9H147 329 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 C14orf119Q9NWQ9 140 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 VNN3Q9NY84 501 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 HAO1Q9UJM8 370 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 POLR1DQ9Y2S0 133 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 ADAM18Q9Y3Q7 739 aa6.56□□□□□ -1.36
CLIP1-206ENST00000535290 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 PRSS37A4D1T9 235 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 FAM90A22PA8MWA6 464 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SEC14L6B5MCN3 397 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 CDIPTO14735 213 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 TYROBPO43914 113 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 KHDRBS3O75525 346 aaKnown RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 LY86O95711 162 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 AMY1AP04745 511 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 AMY2AP04746 511 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 ACAA1P09110 424 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 IDO1P14902 403 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 CCL3L1P16619 93 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SDHAP31040 664 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 GRK5P34947 590 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SLC1A6P48664 564 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SLC25A1P53007 311 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 GP2P55259 537 aaKnown RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 MXRA7P84157 204 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 MZT1Q08AG7 82 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 KCNMB1Q16558 191 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 LRIF1Q5T3J3 769 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 CFAP77Q6ZQR2 320 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 DPY19L4Q7Z388 723 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 MAVSQ7Z434 540 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 PIGWQ7Z7B1 504 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 C17orf53Q8N3J3 647 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 ZNRF1Q8ND25 227 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 KLHL30-AS1Q8NEE0 82 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 BCAS4Q8TDM0 211 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 TM2D3Q9BRN9 247 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SYT4Q9H2B2 425 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 PPP1R3EQ9H7J1 279 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 PPCSQ9HAB8 311 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 SDR39U1Q9NRG7 319 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 ZIM2Q9NZV7 527 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 VAPAQ9P0L0 249 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.55□□□□□ -1.36
CLIP1-206ENST00000535290 MED31Q9Y3C7 131 aa6.55□□□□□ -1.36
CLIP1-206ENST00000535290 PSMB11A5LHX3 300 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 ODF3BA8MYP8 253 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 CCL24O00175 119 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 ARG1P05089 322 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 IFI30P13284 250 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 GPX2P18283 190 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 MYF6P23409 242 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 CD24P25063 80 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 NAA10P41227 235 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 SLC34A1Q06495 639 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TRAP1Q12931 704 aaKnown RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 PIN1Q13526 163 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 MPP2Q14168 576 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 SELPLGQ14242 412 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 GLYATL3Q5SZD4 288 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TMEM200BQ69YZ2 307 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TSEN54Q7Z6J9 526 aaKnown RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 LINC00346Q8IVM7 164 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TMEM185AQ8NFB2 350 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 SLC26A10Q8NG04 563 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 OR8S1Q8NH09 359 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 GATAD1Q8WUU5 269 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 UBLCP1Q8WVY7 318 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TAMM41Q96BW9 452 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 FOXRED1Q96CU9 486 aaPredicted RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 BPIFA2Q96DR5 249 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 PITX2Q99697 317 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 NUAK2Q9H093 628 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 PNRC2Q9NPJ4 139 aaKnown RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 GRHPRQ9UBQ7 328 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 RIMS3Q9UJD0 308 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 TBL2Q9Y4P3 447 aaKnown RBP6.54□□□□□ -1.36
CLIP1-206ENST00000535290 HILPDAQ9Y5L2 63 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 GMEB1Q9Y692 573 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 ALMS1Q8TCU4 4167 aa6.54□□□□□ -1.36
CLIP1-206ENST00000535290 IGKV1D-17A0A075B6S4 117 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 TRBV5-3A0A0A0MS03 114 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 IGLV1-36A0A0B4J1U3 117 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 DCTN6O00399 190 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 XKRYO14609 159 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 AKR7A2O43488 359 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 AHCYL1O43865 530 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 HCKP08631 526 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 TNFRSF1BP20333 461 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 AZGP1P25311 298 aaKnown RBP6.53□□□□□ -1.36
CLIP1-206ENST00000535290 SLC6A1P30531 599 aa6.53□□□□□ -1.36
CLIP1-206ENST00000535290 MDH1P40925 334 aaKnown RBP6.53□□□□□ -1.36
CLIP1-206ENST00000535290 GABRA2P47869 451 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms