RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 DMRTC1Q5HYR2 192 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 RPUSD3Q6P087 351 aaKnown RBP16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 PTOV1Q86YD1 416 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 EXTL1Q92935 676 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 LRFN3Q9BTN0 628 aa16.33■□□□□ 0.21
SFSWAP-203ENST00000535236 M0R1X1 148 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 SEMG1P04279 462 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 TRAPPC2P0DI81 140 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 TRAPPC2BP0DI82 140 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 BMP5P22003 454 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 GNG3P63215 75 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 PMP22Q01453 160 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 HFEQ30201 348 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 OR4S1Q8NGB4 309 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF629Q9UEG4 869 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 R4GN57 208 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 SERPINE3A8MV23 424 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 C1QBP02746 253 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 MLF1P58340 268 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 FAM162BQ5T6X4 162 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 OR5M8Q8NGP6 311 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 OCIAD1Q9NX40 245 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 RBP4P02753 201 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 IL5P05113 134 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 CD80P33681 288 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 C4orf17Q53FE4 359 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 LYG2Q86SG7 212 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 TP53I13Q8NBR0 393 aaPredicted RBP16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 NTN4Q9HB63 628 aa16.33■□□□□ 0.2
SFSWAP-203ENST00000535236 CNN1P51911 297 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 RPEQ96AT9 228 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 VN1R1Q9GZP7 353 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 A0A0A6YYJ9 748 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 MNX1P50219 401 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 TOMM34Q15785 309 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 GPR32P1Q8NGA4 272 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 OR1L3Q8NH93 324 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 ESRP2Q9H6T0 727 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 FOXJ3Q9UPW0 622 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 RCL1Q9Y2P8 373 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 CXorf51AA0A1B0GTR3 108 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 OR2J3O76001 311 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF485Q8NCK3 441 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 DUS3LQ96G46 650 aaKnown RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 NKX6-2Q9C056 277 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 A0A1W2PR80 420 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 GNG10P50151 68 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 CLDN23Q96B33 292 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 TMEM56Q96MV1 263 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 ARHGDIGQ99819 225 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 LRP12Q9Y561 859 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 TCRBV5S2A0A599 114 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 GPR31O00270 319 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 FUT3P21217 361 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 SSPNQ14714 243 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 UBE3DQ7Z6J8 389 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 FGF20Q9NP95 211 aaPredicted RBP16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 FLVCR2Q9UPI3 526 aa16.32■□□□□ 0.2
SFSWAP-203ENST00000535236 PDZK1IP1Q13113 114 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 C1orf210Q8IVY1 113 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 SMIM7Q9BQ49 75 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 K7EQS6 105 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 AAMDCQ9H7C9 122 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 PRRC2BQ5JSZ5 2229 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 G3V3Q6 166 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 B4GALNT1Q00973 533 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 ACER2Q5QJU3 275 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 ANKRD37Q7Z713 158 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 GNRHR2Q96P88 292 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 GABRB1P18505 474 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 ZNF117Q03924 483 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 PRSS36Q5K4E3 855 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 LINC00299Q6ZSB3 139 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 OR5AP2Q8NGF4 316 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 OTOSQ8NHW6 89 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 SPSB1Q96BD6 273 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 SLC25A32Q9H2D1 315 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 FZR1Q9UM11 496 aa16.31■□□□□ 0.2
SFSWAP-203ENST00000535236 PCBP3P57721 371 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 OR2T2Q6IF00 324 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 ORAI1Q96D31 301 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 GSX2Q9BZM3 304 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 CDC14BO60729 498 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 SULT1A3P0DMM9 295 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 SULT1A4P0DMN0 295 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 FUT7Q11130 342 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 OR52N4Q8NGI2 321 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 RXFP4Q8TDU9 374 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 PLPPR2Q96GM1 343 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 ARL2-SNX15V9GYD0 113 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 DDX60Q8IY21 1712 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 PPM1DO15297 605 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 SSBP1Q04837 148 aaKnown RBP16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 FAHD1Q6P587 224 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 SIGLECL1Q8N7X8 197 aa16.3■□□□□ 0.2
SFSWAP-203ENST00000535236 OR4C3Q8NH37 302 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms