RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 NUS1Q96E22 293 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 COQ2Q96H96 371 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RILPQ96NA2 401 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 NEDD4LQ96PU5 975 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RBP7Q96R05 134 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CITED1Q99966 193 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 MARVELD1Q9BSK0 173 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CHRDL1Q9BU40 450 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 PAPOLGQ9BWT3 736 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 OCR1Q9BZK8 76 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RACGAP1Q9H0H5 632 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SLC25A51Q9H1U9 297 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 KAT8Q9H7Z6 458 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 TRIM45Q9H8W5 580 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 CAB39LQ9H9S4 337 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 C3orf14Q9HBI5 128 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 LPAR2Q9HBW0 351 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ABCB10Q9NRK6 738 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ZNF275Q9NSD4 429 aaPredicted RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 IMP3Q9NV31 184 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 LYARQ9NX58 379 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 APOBEC3BQ9UH17 382 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 CD84Q9UIB8 345 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 RARRES3Q9UL19 164 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 SLC17A4Q9Y2C5 497 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 MRPS18CQ9Y3D5 142 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 SAMHD1Q9Y3Z3 626 aaKnown RBP2.72□□□□□ -1.97
USP48-215ENST00000534705 WDR45Q9Y484 360 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 ATG4BQ9Y4P1 393 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 OR1A2Q9Y585 309 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 PEX16Q9Y5Y5 336 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 NPTNQ9Y639 398 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 COLEC10Q9Y6Z7 277 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 V9GYH0 126 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CFAP46Q8IYW2 2715 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 KALRNO60229 2985 aa2.72□□□□□ -1.97
USP48-215ENST00000534705 CNTRLQ7Z7A1 2325 aa2.71□□□□□ -1.97
USP48-215ENST00000534705 PPIAL4CA0A0B4J2A2 164 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 ATP6AP2A0A1C7CYW4 349 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 A0A1W2PP18 115 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 SUPT3HB4E1H0 165 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 HSBP1L1C9JCN9 74 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 LMO7DNF2Z398 122 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 G3V3Q6 166 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 H3BTX0 84 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 M0R3G1 203 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 FXYD1O00168 92 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 EI24O14681 340 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 AIM2O14862 343 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PLA2G10O15496 165 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 B4GAT1O43505 415 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 TNFSF12O43508 249 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 RNF13O43567 381 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 RAD1O60671 282 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 GPX5O75715 221 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 SNAPC5O75971 98 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 CCNB2O95067 398 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 MPC2O95563 127 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 FGF1P05230 155 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 RPLP0P05388 317 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 GP1BAP07359 652 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 FHP07954 510 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 ACSM4P0C7M7 580 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PIRTP0C851 137 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 OR8G3PP0DMU2 310 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PPIAL4GP0DN37 164 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 MUC1P15941 1255 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 MSR1P21757 451 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 MYL9P24844 172 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PAX6P26367 422 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 AK4P27144 223 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 GIFP27352 417 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 ELK4P28324 431 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 GTF2E2P29084 291 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 RPL22P35268 128 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 GPX4P36969 197 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 RFC3P40938 356 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 CRYBA2P53672 197 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PKNOX1P55347 436 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 RGS8P57771 180 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 RRAS2P62070 204 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 NCS1P62166 190 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 BTG1P62324 171 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 RPS15P62841 145 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 SRPXP78539 464 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 CD47Q08722 323 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PJVKQ0ZLH3 352 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 BTN1A1Q13410 526 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PEX6Q13608 980 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 EXOSC2Q13868 293 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 TFDP2Q14188 446 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 GRB7Q14451 532 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 GANABQ14697 944 aaKnown RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 P2RY14Q15391 338 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 ZNF79Q15937 498 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 C15orf32Q32M92 178 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 NKAIN1Q4KMZ8 207 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 ZNF658BQ4V348 819 aaPredicted RBP2.71□□□□□ -1.98
USP48-215ENST00000534705 HSD17B12Q53GQ0 312 aa2.71□□□□□ -1.98
USP48-215ENST00000534705 PYCR3Q53H96 274 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms