RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	NOTCH3	Q9UM47	2321 aa		4.94	□□□□□ -1.62
PICALM-223	ENST00000534412	LOC100653049	A0A140TA62	436 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	MLNR	O43193	412 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	XPNPEP2	O43895	674 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SERPINB7	O75635	380 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	KRT34	O76011	436 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	MSR1	P21757	451 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	PMEL	P40967	661 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SRP9	P49458	86 aa	Known RBP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	EFNB2	P52799	333 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SCARB2	Q14108	478 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ENDOG	Q14249	297 aa	Known RBP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ENTPD8	Q5MY95	495 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	CLEC12A	Q5QGZ9	265 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	FAM201A	Q5SY85	155 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	LRIF1	Q5T3J3	769 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	GCNT6	Q5T4J0	391 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	METTL11B	Q5VVY1	283 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	WDR93	Q6P2C0	686 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	TTC33	Q6PID6	262 aa	Predicted RBP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SLC25A47	Q6Q0C1	308 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	METAP1D	Q6UB28	335 aa	Predicted RBP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	FBXW12	Q6X9E4	464 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	IGFN1	Q86VF2	1251 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ARMC8	Q8IUR7	673 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	MSRB3	Q8IXL7	192 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	OR8G5	Q8NG78	346 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	OR6T1	Q8NGN1	323 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	OR9I1	Q8NGQ6	314 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	FNDC8	Q8TC99	324 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ADAMTS16	Q8TE57	1224 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	NSMAF	Q92636	917 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	PTP4A1	Q93096	173 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ERGIC1	Q969X5	290 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	PHF21A	Q96BD5	680 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	MCHR1	Q99705	422 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	PRSS27	Q9BQR3	290 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	ALG12	Q9BV10	488 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	INIP	Q9NRY2	104 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SACS	Q9NZJ4	4579 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412	SLC13A4	Q9UKG4	626 aa		4.93	□□□□□ -1.62
PICALM-223	ENST00000534412		A0A1B0GVI7	797 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	TRAPPC13	A5PLN9	417 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	BTBD17	A6NE02	478 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	OR6C6	A6NF89	314 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	TRPC5OS	A6NMA1	111 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	CPSF4L	A6NMK7	179 aa	Known RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	C12orf71	A8MTZ7	269 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	BLOC1S5-TXNDC5	H3BN57	136 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	KPNA4	O00629	521 aa	Predicted RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	HDAC3	O15379	428 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	DOK2	O60496	412 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	FCN3	O75636	299 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	OR7A10	O76100	309 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	MT-ND1	P03886	318 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	HIST1H2AB	P04908	130 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	FBP1	P09467	338 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	UMPS	P11172	480 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	GPX2	P18283	190 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	BGN	P21810	368 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	PPIB	P23284	216 aa	Known RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	AQP1	P29972	269 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	GABRA5	P31644	462 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	AQP2	P41181	271 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	RBM34	P42696	430 aa	Known RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	MRPL19	P49406	292 aa	Known RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	POLR2J	P52435	117 aa	Known RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	RAD23A	P54725	363 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	CD47	Q08722	323 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SCRN3	Q0VDG4	424 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	MAB21L1	Q13394	359 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SGCA	Q16586	387 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	DUSP7	Q16829	419 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	CDON	Q4KMG0	1287 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	RUNDC3A	Q59EK9	446 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SLC35E4	Q6ICL7	350 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	HIST3H2A	Q7L7L0	130 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	MOGAT3	Q86VF5	341 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	IQCF1	Q8N6M8	205 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	CLDN22	Q8N7P3	220 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SMYD1	Q8NB12	490 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	PCYOX1L	Q8NBM8	494 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SCCPDH	Q8NBX0	429 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	GPR32P1	Q8NGA4	272 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	OR4D11	Q8NGI4	311 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	OR13G1	Q8NGZ3	307 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	OR5R1	Q8NH85	324 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	MOSPD2	Q8NHP6	518 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	LRRC8C	Q8TDW0	803 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	NPRL2	Q8WTW4	380 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	SGCD	Q92629	289 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	HIST1H2AC	Q93077	130 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	LHX4	Q969G2	390 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	RASD2	Q96D21	266 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	TECTB	Q96PL2	329 aa		4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	ROPN1B	Q9BZX4	212 aa	Predicted RBP	4.92	□□□□□ -1.62
PICALM-223	ENST00000534412	TXNIP	Q9H3M7	391 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms