RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SRA1Q9HD15 236 aaKnown RBP7.54□□□□□ -1.2
PACS1-214ENST00000533811 SPAG4Q9NPE6 437 aa7.54□□□□□ -1.2
PACS1-214ENST00000533811 SNTG1Q9NSN8 517 aa7.54□□□□□ -1.2
PACS1-214ENST00000533811 C14orf119Q9NWQ9 140 aa7.54□□□□□ -1.2
PACS1-214ENST00000533811 VSX1Q9NZR4 365 aaPredicted RBP7.54□□□□□ -1.2
PACS1-214ENST00000533811 SNX13Q9Y5W8 968 aa7.54□□□□□ -1.2
PACS1-214ENST00000533811 NKX6-3A6NJ46 265 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 DCTN6O00399 190 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 CHST1O43916 411 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 PTBP3O95758 552 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 LHBP01229 141 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 TFF1P04155 84 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 IFNW1P05000 195 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 MUC1P15941 1255 aaPredicted RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 HOXB6P17509 224 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 NDUFB7P17568 137 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 GRK5P34947 590 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 CDKN2AP42771 156 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 RPS6KA3P51812 740 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 SLC7A2P52569 658 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 CSNK2BP67870 215 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 ACSM1Q08AH1 577 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 BLMHQ13867 455 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 KRTAP27-1Q3LI81 207 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 PLA1AQ53H76 456 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 SAMD4BQ5PRF9 694 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 GLYATL3Q5SZD4 288 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 SLC18B1Q6NT16 456 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 TMPRSS11FQ6ZWK6 438 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 DPY19L4Q7Z388 723 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 VTCN1Q7Z7D3 282 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 DEFB107AQ8IZN7 70 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 RNF113BQ8IZP6 322 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 FAM156AQ8NDB6 213 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 OR9Q1Q8NGQ5 310 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 TNFRSF14Q92956 283 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 SPTSSAQ969W0 71 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 CADM1Q9BY67 442 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 CMTM6Q9NX76 183 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 MRPL15Q9P015 296 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 ZNF391Q9UJN7 358 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 TMEM5Q9Y2B1 443 aa7.53□□□□□ -1.2
PACS1-214ENST00000533811 SF3B6Q9Y3B4 125 aaKnown RBP7.53□□□□□ -1.2
PACS1-214ENST00000533811 IGLV1-36A0A0B4J1U3 117 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 WI2-2373I1.2A0A1W2PRP0 233 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 H0YAE9 185 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 GSTA4O15217 222 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 GMNNO75496 209 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 PPP1R3DO95685 299 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 ZNF682O95780 498 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 RENP00797 406 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 PF4P02776 101 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 PF4V1P10720 104 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 ANOS1P23352 680 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 KDELR2P33947 212 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 MSX2P35548 267 aaPredicted RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 GSK3BP49841 420 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 SELENOWP63302 87 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 LIPEQ05469 1076 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 RFX4Q33E94 735 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 SLC36A3Q495N2 470 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 TSEN54Q7Z6J9 526 aaKnown RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 FAM185AQ8N0U4 392 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 OR6V1Q8N148 313 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 SLC26A10Q8NG04 563 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 OR2T12Q8NG77 320 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 RSRC1Q96IZ7 334 aaKnown RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 ERMAPQ96PL5 475 aaPredicted RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 KCTD14Q9BQ13 255 aaPredicted RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 FN3KQ9H479 309 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 METTL8Q9H825 291 aaKnown RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 ZNF702PQ9H963 129 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 ELL3Q9HB65 397 aaPredicted RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 NRIP3Q9NQ35 241 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 RPRD1BQ9NQG5 326 aaKnown RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 ABCD2Q9UBJ2 740 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
PACS1-214ENST00000533811 B9D1Q9UPM9 204 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 SIGLEC7Q9Y286 467 aa7.52□□□□□ -1.21
PACS1-214ENST00000533811 COL7A1Q02388 2944 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 TRBV23-1A0A0A0MS06 115 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 ANKRD30BLA7E2S9 258 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 ADARB2-AS1A8MUL3 147 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 FAM220BPB1ANY3 271 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 M0R1W7 72 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 NME4O00746 187 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 FFAR1O14842 300 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 TBX1O43435 398 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 SLC2A1P11166 492 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 HSD17B1P14061 328 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 ZNF823P16415 610 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 NAA10P41227 235 aaPredicted RBP7.51□□□□□ -1.21
PACS1-214ENST00000533811 RPS27P42677 84 aaKnown RBP7.51□□□□□ -1.21
PACS1-214ENST00000533811 PRKXP51817 358 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 TAF13Q15543 124 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 FGD3Q5JSP0 725 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 WDR82Q6UXN9 313 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 WDR86Q86TI4 376 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 DTX3Q8N9I9 347 aa7.51□□□□□ -1.21
PACS1-214ENST00000533811 OR1M1Q8NGA1 313 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms