RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 FMODQ06828 376 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 SEZ6L2Q6UXD5 910 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 BTN2A1Q7KYR7 527 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 HIST3H2AQ7L7L0 130 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF676Q8N7Q3 588 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 OR10D3Q8NH80 312 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF417Q8TAU3 575 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 PHYHIPQ92561 330 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 NEUROG1Q92886 237 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 HIST1H2ACQ93077 130 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 MCHR2Q969V1 340 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 HAVCR1Q96D42 359 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ADGRG7Q96K78 797 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 KLHL15Q96M94 604 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF587Q96SQ5 575 aaPredicted RBP7.15□□□□□ -1.26
NEDD8-207ENST00000533242 USB1Q9BQ65 265 aaKnown RBP7.15□□□□□ -1.26
NEDD8-207ENST00000533242 GON7Q9BXV9 100 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ELOVL3Q9HB03 270 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 PLEKHA1Q9HB21 404 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 GDF2Q9UK05 429 aaPredicted RBP7.15□□□□□ -1.26
NEDD8-207ENST00000533242 MGAT4AQ9UM21 535 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 TMED7Q9Y3B3 224 aa7.15□□□□□ -1.26
NEDD8-207ENST00000533242 ROS1P08922 2347 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 A0A087WZY1 265 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 A0A1W2PQD3 144 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 GABARAPH6UMI1 98 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 RENP00797 406 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 CD8AP01732 235 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 HLA-DQA2P01906 255 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 ITGA5P08648 1049 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 TACSTD2P09758 323 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 ADH6P28332 368 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 AGTR1P30556 359 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 CENPAP49450 140 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 TAS2R20P59543 309 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 GUCA2AQ02747 115 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 LOXL1Q08397 574 aaPredicted RBP7.15□□□□□ -1.27
NEDD8-207ENST00000533242 DYRK1AQ13627 763 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM249Q2WGJ8 235 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 TMEM69Q5SWH9 247 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 C1orf140Q5VVS0 124 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 HACD4Q5VWC8 232 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 OR7E24Q6IFN5 339 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 OR10H5Q8NGA6 315 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 OR51D1Q8NGF3 324 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 OR4D10Q8NGI6 311 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 KCNK17Q96T54 332 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 SEC22CQ9BRL7 303 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 HEXA-AS1Q9H8Q6 139 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 MRTO4Q9UKD2 239 aaKnown RBP7.15□□□□□ -1.27
NEDD8-207ENST00000533242 FBXL3Q9UKT7 428 aa7.15□□□□□ -1.27
NEDD8-207ENST00000533242 SLC22A23A1A5C7 686 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 CENPBD1B2RD01 187 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 FTCDNL1E5RQL4 147 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 PLPP3O14495 311 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 PDCD5O14737 125 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 CXCL13O43927 109 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 LMX1BO60663 402 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 NDUFS7O75251 213 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 ALDOBP05062 364 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 SPARCP09486 303 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 SULT1A3P0DMM9 295 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 SULT1A4P0DMN0 295 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 IL32P24001 234 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 RAD52P43351 418 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 RPL27P61353 136 aaKnown RBP7.14□□□□□ -1.27
NEDD8-207ENST00000533242 C17orf67Q0P5P2 114 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 CAMK2DQ13557 499 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 PDSS1Q5T2R2 415 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 SFRP5Q5T4F7 317 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 FAM69AQ5T7M9 428 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 CD276Q5ZPR3 534 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 GPR139Q6DWJ6 353 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 ALKBH2Q6NS38 261 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 KCTD20Q7Z5Y7 419 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 GABRG1Q8N1C3 465 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 OR2V1Q8NHB1 315 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 ROBO4Q8WZ75 1007 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 OR2M2Q96R28 347 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 OR8B4Q96RC9 309 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 POTEKPQ9BYX7 375 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 NDEL1Q9GZM8 345 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 C12orf10Q9HB07 376 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 CA10Q9NS85 328 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 FKBP7Q9Y680 259 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 PRR14LQ5THK1 2151 aa7.14□□□□□ -1.27
NEDD8-207ENST00000533242 IGHV4-30-2A0A087WSY4 118 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANKRD20A5PA0PJZ0 165 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 MEIS3P1A6NDR6 274 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ARPC1BO15143 372 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 EIF4E2O60573 245 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 KRT33AO76009 404 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ALX3O95076 343 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANXA3P12429 323 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 ANXA7P20073 488 aaKnown RBP7.13□□□□□ -1.27
NEDD8-207ENST00000533242 PGCP20142 388 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 EGR3Q06889 387 aa7.13□□□□□ -1.27
NEDD8-207ENST00000533242 CBFBQ13951 182 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms