RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ARR3P36575 388 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 GNALP38405 381 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 CDSNQ15517 529 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 C4orf17Q53FE4 359 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 OR1F12Q8NHA8 337 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 NANOS1Q8WY41 292 aaKnown RBP16.03■□□□□ 0.16
SMPD1-208ENST00000533123 PGAM5Q96HS1 289 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 BOD1Q96IK1 185 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 NEDD4LQ96PU5 975 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 HDHD2Q9H0R4 259 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 MRPS7Q9Y2R9 242 aaKnown RBP16.03■□□□□ 0.16
SMPD1-208ENST00000533123 FAM90A27PA6NNH2 459 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 M0R135 149 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 CALCBP10092 127 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 HTR5AP47898 357 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 RFX2P48378 723 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 HGFACQ04756 655 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 TRIQKQ629K1 86 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 SETD6Q8TBK2 473 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 ZNF799Q96GE5 643 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 MS4A3Q96HJ5 214 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 ST6GAL2Q96JF0 529 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 LYZL4Q96KX0 146 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 C1QTNF6Q9BXI9 259 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 ELOVL5Q9NYP7 299 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 FLNCQ14315 2725 aa16.03■□□□□ 0.16
SMPD1-208ENST00000533123 OR6C6A6NF89 314 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 OR5H1A6NKK0 313 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 LANCL1O43813 399 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 AGFG2O95081 481 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 CRYGSP22914 178 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 RNASE12Q5GAN4 147 aaKnown RBP16.02■□□□□ 0.16
SMPD1-208ENST00000533123 ZNF584Q8IVC4 421 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 CCDC36Q8IYA8 594 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 C17orf78Q8N4C9 275 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 OR51D1Q8NGF3 324 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 SYNPRQ8TBG9 265 aa16.02■□□□□ 0.16
SMPD1-208ENST00000533123 PLA2G10O15496 165 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 CCL2P13500 99 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 HOXB1P14653 301 aaPredicted RBP16.02■□□□□ 0.15
SMPD1-208ENST00000533123 RAB11BQ15907 218 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 SNAI3Q3KNW1 292 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 DPPA2Q7Z7J5 298 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 CA5BP1Q8WTZ4 195 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 ACTR6Q9GZN1 396 aa16.02■□□□□ 0.15
SMPD1-208ENST00000533123 NKX2-6A6NCS4 301 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 SLC17A2O00624 439 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 TMEM127O75204 238 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 HLA-DQB1P01920 261 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 CFPP27918 469 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 CCKARP32238 428 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 DDOSTP39656 456 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 ASAH1Q13510 395 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 ZFP69Q49AA0 526 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 GLYATL3Q5SZD4 288 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 FAM166AQ6J272 317 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 PYHIN1Q6K0P9 492 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 ALKBH2Q6NS38 261 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 ASCC1Q8N9N2 400 aaKnown RBP16.01■□□□□ 0.15
SMPD1-208ENST00000533123 SPTSSAQ969W0 71 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 CMTM3Q96MX0 182 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 ZNF75AQ96N20 296 aa16.01■□□□□ 0.15
SMPD1-208ENST00000533123 C11orf54Q9H0W9 315 aaPredicted RBP16.01■□□□□ 0.15
SMPD1-208ENST00000533123 C16orf97H3BN30 126 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 ZNF20P17024 532 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 CCL1P22362 96 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 CCNOP22674 350 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 POU3F4P49335 361 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 EFNB2P52799 333 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 PLP2Q04941 152 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 ECH1Q13011 328 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 GLT8D1Q68CQ7 371 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 C22orf34Q6ZV56 151 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 JAGN1Q8N5M9 183 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 OR13C9Q8NGT0 318 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 ETV7Q9Y603 341 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 LOC100509620A0A075B734 347 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 ZG16O60844 167 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 CELA3BP08861 270 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 STOMP27105 288 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 ASCL1P50553 236 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 CDK10Q15131 360 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 TIMM23BQ5SRD1 257 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 MTFR2Q6P444 385 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 MYPOPQ86VE0 399 aaPredicted RBP16■□□□□ 0.15
SMPD1-208ENST00000533123 C19orf18Q8NEA5 215 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 OR1M1Q8NGA1 313 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 OR52N4Q8NGI2 321 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 GCDHQ92947 438 aaPredicted RBP16■□□□□ 0.15
SMPD1-208ENST00000533123 TRIM63Q969Q1 353 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 SLC25A28Q96A46 364 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 THAP7Q9BT49 309 aaPredicted RBP16■□□□□ 0.15
SMPD1-208ENST00000533123 MRI1Q9BV20 369 aa16■□□□□ 0.15
SMPD1-208ENST00000533123 CENPXA8MT69 81 aa15.99■□□□□ 0.15
SMPD1-208ENST00000533123 A8MV72 311 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-208ENST00000533123 IGLV3-1P01715 115 aa15.99■□□□□ 0.15
SMPD1-208ENST00000533123 IDH3GP51553 393 aaPredicted RBP15.99■□□□□ 0.15
SMPD1-208ENST00000533123 ART1P52961 327 aa15.99■□□□□ 0.15
SMPD1-208ENST00000533123 DGCR2P98153 550 aa15.99■□□□□ 0.15
SMPD1-208ENST00000533123 DOK3Q7L591 496 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms