RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	GUCA2A	Q02747	115 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	SEC23B	Q15437	767 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	CLEC12A	Q5QGZ9	265 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	FAM201A	Q5SY85	155 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR2T2	Q6IF00	324 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	PGBD2	Q6P3X8	592 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR4S1	Q8NGB4	309 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	RHOXF1	Q8NHV9	184 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	TRUB1	Q8WWH5	349 aa	Known RBP	10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	CFHR4	Q92496	578 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	NIPSNAP1	Q9BPW8	284 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	RIBC2	Q9H4K1	309 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	PLCXD1	Q9NUJ7	323 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	TMEM100	Q9NV29	134 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	PTTG3P	Q9NZH4	202 aa		10.25	□□□□□ -0.77
CAPN1-223	ENST00000533079	ANKRD61	A6NGH8	418 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	ZAR1L	A6NP61	321 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR10H3	O60404	316 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	FAM20B	O75063	409 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	PMEL	P40967	661 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	CRISP1	P54107	249 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	LSM6	P62312	80 aa	Known RBP	10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	CDON	Q4KMG0	1287 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	FGD3	Q5JSP0	725 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	LAIR2	Q6ISS4	152 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	NKAIN4	Q8IVV8	208 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	PIP4P2	Q8N4L2	257 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	DTX3	Q8N9I9	347 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	BHLHE23	Q8NDY6	225 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR9Q2	Q8NGE9	314 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR1F12	Q8NHA8	337 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	GNPDA2	Q8TDQ7	276 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	ACOT11	Q8WXI4	607 aa	Predicted RBP	10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	SGCD	Q92629	289 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	HCAR1	Q9BXC0	346 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	DUSP21	Q9H596	190 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	FN3KRP	Q9HA64	309 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	EMC7	Q9NPA0	242 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079	RHCG	Q9UBD6	479 aa		10.24	□□□□□ -0.77
CAPN1-223	ENST00000533079		A0A087WUU8	490 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	TRAV38-1	A0A0B4J264	116 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	TEX13C	A0A0J9YWL9	993 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	LGALS8	O00214	317 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	ADAM20	O43506	726 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	JUNB	P17275	347 aa	Predicted RBP	10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	EPHA2	P29317	976 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	EFNB2	P52799	333 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	CTXN1	P60606	82 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	TSPAN31	Q12999	210 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	MAB21L1	Q13394	359 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	PTGES3	Q15185	160 aa	Known RBP	10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC25A30	Q5SVS4	291 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC35E4	Q6ICL7	350 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	ZNF773	Q6PK81	442 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	MBOAT2	Q6ZWT7	520 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	VMO1	Q7Z5L0	202 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	PLPP7	Q8NBV4	271 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	BPIFA2	Q96DR5	249 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC22A4	Q9H015	551 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	HDHD2	Q9H0R4	259 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	RANBP3	Q9H6Z4	567 aa	Predicted RBP	10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	SMURF1	Q9HCE7	757 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	KRCC1	Q9NPI7	259 aa	Predicted RBP	10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	RNF7	Q9UBF6	113 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	TPRKB	Q9Y3C4	175 aa		10.23	□□□□□ -0.77
CAPN1-223	ENST00000533079	IGHV3-64D	A0A0J9YX35	117 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	OOEP	A6NGQ2	149 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	XKRY	O14609	159 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	PTBP3	O95758	552 aa	Known RBP	10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	SCG5	P05408	212 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	GABRB1	P18505	474 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	EEF1B2	P24534	225 aa	Known RBP	10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	GSS	P48637	474 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	CDC42	P60953	191 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	SNRPG	P62308	76 aa	Known RBP	10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	ARF6	P62330	175 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	IL5RA	Q01344	420 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLX4IP	Q5VYV7	408 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	RASSF6	Q6ZTQ3	369 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	BTN2A1	Q7KYR7	527 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	RRM2B	Q7LG56	351 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	CMTM4	Q8IZR5	234 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	LRRC75A	Q8NAA5	344 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	OR4C13	Q8NGP0	309 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC7A6	Q92536	515 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	DGCR14	Q96DF8	476 aa	Known RBP	10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	COQ7	Q99807	217 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	SCN3B	Q9NY72	215 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	KAAG1	Q9UBP8	84 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	RPUSD1	Q9UJJ7	312 aa	Known RBP	10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	PLXNB1	O43157	2135 aa		10.22	□□□□□ -0.77
CAPN1-223	ENST00000533079	COL7A1	Q02388	2944 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	DNAH3	Q8TD57	4116 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC1A7	O00341	560 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	PAH	P00439	452 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	HLA-DPB1	P04440	258 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	KIR2DS4	P43632	304 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	OMP	P47874	163 aa		10.21	□□□□□ -0.77
CAPN1-223	ENST00000533079	SLC9A3	P48764	834 aa		10.21	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms