RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 THBS2P35442 1172 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF829Q3KNS6 432 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-210ENST00000532935 ZIK1Q3SY52 487 aaPredicted RBP12.88□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF404Q494X3 552 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 LPCAT4Q643R3 524 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 IZUMO2Q6UXV1 221 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 FTMTQ8N4E7 242 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 FAM81AQ8TBF8 368 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 HRASLS5Q96KN8 279 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 TMEM246Q9BRR3 403 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 PAPOLGQ9BWT3 736 aaKnown RBP12.88□□□□□ -0.35
CPSF1-210ENST00000532935 Q9H521 79 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 PPP1R3EQ9H7J1 279 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 RNF7Q9UBF6 113 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 LRCH1Q9Y2L9 728 aa12.88□□□□□ -0.35
CPSF1-210ENST00000532935 A0A0U1RQV5 110 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 A6NLC8 198 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 E9PQ18 207 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 J3QLI3 93 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 MAGEB4O15481 346 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-210ENST00000532935 WNT2P09544 360 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 GATA3P23771 443 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 GNALP38405 381 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 EGR3Q06889 387 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
CPSF1-210ENST00000532935 POU4F2Q12837 409 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 ESCO2Q56NI9 601 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 ZBTB49Q6ZSB9 765 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
CPSF1-210ENST00000532935 UBE2FQ969M7 185 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 TMPRSS13Q9BYE2 586 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 PBOV1Q9GZY1 135 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 C1orf123Q9NWV4 160 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 MIOXQ9UGB7 285 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 RAB26Q9ULW5 256 aa12.87□□□□□ -0.35
CPSF1-210ENST00000532935 PPIAL4CA0A0B4J2A2 164 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 A8MXK9 166 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 SRSF10O75494 262 aaKnown RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 CST4P01036 141 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 AVPP01185 164 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 CPT2P23786 658 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 HOXA4Q00056 320 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 PRDX4Q13162 271 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 TMED1Q13445 227 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 C1orf229Q6ZS94 237 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF826PQ6ZT77 177 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 SSX6Q7RTT6 188 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 WDR86Q86TI4 376 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 C19orf18Q8NEA5 215 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 DEFB108BQ8NET1 73 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 RFKQ969G6 155 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 ITPKCQ96DU7 683 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 MBOAT4Q96T53 435 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 TBX5Q99593 518 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 MDFIQ99750 246 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 NUFIP1Q9UHK0 495 aaKnown RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 MRM2Q9UI43 246 aaKnown RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 POLR3KQ9Y2Y1 108 aaPredicted RBP12.86□□□□□ -0.35
CPSF1-210ENST00000532935 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
CPSF1-210ENST00000532935 LOC105371242A0A075B767 164 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 hCG_1807616A0A1W2PRN6 198 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 ANXA2P2A6NMY6 339 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 ZNF850A8MQ14 1090 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 TRAPPC2LH3BP13 241 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 PHF1O43189 567 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 DENRO43583 198 aaKnown RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 APOL3O95236 402 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 IGLV3-1P01715 115 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 OR2T7P0C7T2 308 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 ATP6V1E1P36543 226 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 MAP2K3P46734 347 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 IL5RAQ01344 420 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 LRRC36Q1X8D7 754 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 PLEKHG7Q6ZR37 379 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 DCDC5Q6ZRR9 648 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 COMMD2Q86X83 199 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 C11orf53Q8IXP5 236 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 GALNT4Q8N4A0 578 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 OR1M1Q8NGA1 313 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 OR10H4Q8NGA5 316 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 OR51E1Q8TCB6 317 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 PIGCQ92535 297 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 NEIL1Q96FI4 390 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 RDH12Q96NR8 316 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 SLC29A1Q99808 456 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 MICU1Q9BPX6 476 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 SSBP3Q9BWW4 388 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 METTL17Q9H7H0 456 aaPredicted RBP12.85□□□□□ -0.35
CPSF1-210ENST00000532935 MOB1AQ9H8S9 216 aa12.85□□□□□ -0.35
CPSF1-210ENST00000532935 ABCB9Q9NP78 766 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms