RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CYB5R3P00387 301 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-209ENST00000532725 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF16P17020 682 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-209ENST00000532725 HOXB4P17483 251 aaPredicted RBP16.7■□□□□ 0.26
CPSF1-209ENST00000532725 MAP2K3P46734 347 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 IL5RAQ01344 420 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 MZT1Q08AG7 82 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 ZMYND11Q15326 602 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 SMN1Q16637 294 aaKnown RBP16.7■□□□□ 0.26
CPSF1-209ENST00000532725 CDONQ4KMG0 1287 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 TP53I3Q53FA7 332 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 CATSPERDQ86XM0 798 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 C11orf53Q8IXP5 236 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 FTMTQ8N4E7 242 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 NRG4Q8WWG1 115 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF649Q9BS31 505 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF665Q9H7R5 613 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 UFSP2Q9NUQ7 469 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 C14orf119Q9NWQ9 140 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 MPC1Q9Y5U8 109 aa16.7■□□□□ 0.26
CPSF1-209ENST00000532725 LRRC30A6NM36 301 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF850A8MQ14 1090 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 B4DSR2 109 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 H0YAE9 185 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 LMX1BO60663 402 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 FAM20BO75063 409 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 FSTL3O95633 263 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 IGHV2-5P01817 119 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 OR12D2P58182 307 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 BTG1P62324 171 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 RAB40BQ12829 278 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 TMEM155Q4W5P6 130 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 BCL2L15Q5TBC7 163 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 Q6ZSR3 168 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 WDR86Q86TI4 376 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 SEMA6DQ8NFY4 1073 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 OR8S1Q8NH09 359 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 PIGCQ92535 297 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 ITPKCQ96DU7 683 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 FAM71F1Q96KD3 344 aaPredicted RBP16.69■□□□□ 0.26
CPSF1-209ENST00000532725 ADI1Q9BV57 179 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 PAPOLGQ9BWT3 736 aaKnown RBP16.69■□□□□ 0.26
CPSF1-209ENST00000532725 FN3KRPQ9HA64 309 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 RNPEPL1Q9HAU8 725 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 TMEM165Q9HC07 324 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 GNG8Q9UK08 70 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 GTF2A1LQ9UNN4 478 aa16.69■□□□□ 0.26
CPSF1-209ENST00000532725 ISPDA4D126 451 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 FADS2O95864 444 aaKnown RBP16.68■□□□□ 0.26
CPSF1-209ENST00000532725 IGHA1P01876 353 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 GRPP07492 148 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 GNALP38405 381 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 CAPGP40121 348 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 RIPPLY3P57055 190 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 RIPPLY1Q0D2K3 151 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 PRDX4Q13162 271 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 IL18R1Q13478 541 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 KLHL22Q53GT1 634 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 FAM201AQ5SY85 155 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 LHFPL3Q86UP9 236 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 EGFL6Q8IUX8 553 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 PRSS35Q8N3Z0 413 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 SETD9Q8NE22 299 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 OR52I1Q8NGK6 324 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 OR11L1Q8NGX0 322 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 CNIH3Q8TBE1 160 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 OR5P3Q8WZ94 311 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 GAL3ST1Q99999 423 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 ACOXLQ9NUZ1 547 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 TMEM160Q9NX00 188 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 HSPE1-MOB4S4R3N1 261 aa16.68■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF816-ZNF321PA0A0X1KG74 233 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 P2RY10O00398 339 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 MTRF1O75570 445 aaKnown RBP16.67■□□□□ 0.26
CPSF1-209ENST00000532725 DHRS3O75911 302 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF205O95201 554 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 GNAO1P09471 354 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 PSMB10P40306 273 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 MDH2P40926 338 aaKnown RBP16.67■□□□□ 0.26
CPSF1-209ENST00000532725 GALEQ14376 348 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 FAM76BQ5HYJ3 339 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 ZBTB37Q5TC79 503 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 ZNF826PQ6ZT77 177 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 COMMD2Q86X83 199 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 C1orf87Q8N0U7 546 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 OR1M1Q8NGA1 313 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 OR14K1Q8NGZ2 314 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 TFAP2CQ92754 450 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 RAB39BQ96DA2 213 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 FGF23Q9GZV9 251 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-209ENST00000532725 ABCB9Q9NP78 766 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 FGF20Q9NP95 211 aaPredicted RBP16.67■□□□□ 0.26
CPSF1-209ENST00000532725 UBAP1Q9NZ09 502 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 RNF7Q9UBF6 113 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 PIGLQ9Y2B2 252 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 V9GYS6 101 aa16.67■□□□□ 0.26
CPSF1-209ENST00000532725 PPIAL4EA0A075B759 164 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 ANXA2P2A6NMY6 339 aa16.66■□□□□ 0.26
CPSF1-209ENST00000532725 PPIAL4DF5H284 164 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms