RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KDM4DQ6B0I6 523 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 DEGS2Q6QHC5 323 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 MEPCEQ7L2J0 689 aaKnown RBP14.37□□□□□ -0.11
PHRF1-204ENST00000532550 TCEANCQ8N8B7 351 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 OR1M1Q8NGA1 313 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 LRTOMTQ8WZ04 291 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 NUDT16L1Q9BRJ7 211 aaKnown RBP14.37□□□□□ -0.11
PHRF1-204ENST00000532550 RNPEPL1Q9HAU8 725 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 MPC1Q9Y5U8 109 aa14.37□□□□□ -0.11
PHRF1-204ENST00000532550 CCDC182A6NF36 153 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 ACOD1A6NK06 481 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 PSMD9O00233 223 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 ADAM20O43506 726 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 LHBP01229 141 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 PPIAL4GP0DN37 164 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 PSMA6P60900 246 aaKnown RBP14.36□□□□□ -0.11
PHRF1-204ENST00000532550 SLX4IPQ5VYV7 408 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 ZNF841Q6ZN19 808 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 C11orf53Q8IXP5 236 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 GALNT4Q8N4A0 578 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 GCSAMQ8N6F7 178 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 ASB17Q8WXJ9 295 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 PIGCQ92535 297 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 TECTBQ96PL2 329 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 ABCB9Q9NP78 766 aa14.36□□□□□ -0.11
PHRF1-204ENST00000532550 TMEM269A0A1B0GVZ9 245 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 ZAR1LA6NP61 321 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 ZNF850A8MQ14 1090 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 ZNF254O75437 659 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 GYPAP02724 150 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 PRDX4Q13162 271 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 KLF17Q5JT82 389 aaPredicted RBP14.35□□□□□ -0.11
PHRF1-204ENST00000532550 NXNL2Q5VZ03 156 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 ZNF679Q8IYX0 411 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 OR8B12Q8NGG6 310 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 FAM81AQ8TBF8 368 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 TMEM163Q8TC26 289 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 FAM216AQ8WUB2 273 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 LRRC29Q8WV35 223 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 CENPNQ96H22 339 aaPredicted RBP14.35□□□□□ -0.11
PHRF1-204ENST00000532550 LYZL4Q96KX0 146 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 CNN2Q99439 309 aaKnown RBP14.35□□□□□ -0.11
PHRF1-204ENST00000532550 RTL8AQ9BWD3 113 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 MS4A7Q9GZW8 240 aaPredicted RBP14.35□□□□□ -0.11
PHRF1-204ENST00000532550 GABARAPL1Q9H0R8 117 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 PPP1R3EQ9H7J1 279 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 IKZF2Q9UKS7 526 aa14.35□□□□□ -0.11
PHRF1-204ENST00000532550 SLC22A31A6NKX4 558 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 CDIPTO14735 213 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 TNFRSF13BO14836 293 aaPredicted RBP14.34□□□□□ -0.11
PHRF1-204ENST00000532550 CST4P01036 141 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 EPHA2P29317 976 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 DCTDP32321 178 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 MAP2K3P46734 347 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 RIDAP52758 137 aaKnown RBP14.34□□□□□ -0.11
PHRF1-204ENST00000532550 ACTR3P61158 418 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 ACTG1P63261 375 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 EFNB1P98172 346 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 ROM1Q03395 351 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 POU4F2Q12837 409 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 MICBQ29980 383 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 TEX36Q5VZQ5 186 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 C12orf73Q69YU5 71 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 C12orf54Q6X4T0 127 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 KCTD8Q6ZWB6 473 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 BCDIN3DQ7Z5W3 292 aaKnown RBP14.34□□□□□ -0.11
PHRF1-204ENST00000532550 WDR86Q86TI4 376 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 GCDHQ92947 438 aaPredicted RBP14.34□□□□□ -0.11
PHRF1-204ENST00000532550 DACT3Q96B18 629 aaPredicted RBP14.34□□□□□ -0.11
PHRF1-204ENST00000532550 ITPKCQ96DU7 683 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 RNF170Q96K19 258 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 OR8B4Q96RC9 309 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 IL4I1Q96RQ9 567 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 RASSF4Q9H2L5 321 aa14.34□□□□□ -0.11
PHRF1-204ENST00000532550 IGHV3OR15-7A0A075B7D8 119 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 A0A0U1RQV5 110 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 HAX1O00165 279 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 ENSAO43768 121 aaKnown RBP14.33□□□□□ -0.12
PHRF1-204ENST00000532550 LIPFP07098 398 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 MUC1P15941 1255 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-204ENST00000532550 ACKR3P25106 362 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 CSNK2BP67870 215 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 ZNF829Q3KNS6 432 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-204ENST00000532550 AADACL4Q5VUY2 407 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 WDR82Q6UXN9 313 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 COMMD2Q86X83 199 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 FAM90A1Q86YD7 464 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 BCL6BQ8N143 479 aaPredicted RBP14.33□□□□□ -0.12
PHRF1-204ENST00000532550 SIGLECL1Q8N7X8 197 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 OR5P3Q8WZ94 311 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 ITFG2Q969R8 447 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 UPRTQ96BW1 309 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 MNTQ99583 582 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 CIB1Q99828 191 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 PKP2Q99959 881 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 PBOV1Q9GZY1 135 aa14.33□□□□□ -0.12
PHRF1-204ENST00000532550 FAM206AQ9NX38 181 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms