RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 ERGIC1Q969X5 290 aa11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 Q96MT0 163 aa11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 TMEM165Q9HC07 324 aa11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 YAE1D1Q9NRH1 226 aa11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 NOP16Q9Y3C1 178 aaKnown RBP11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 SNX5Q9Y5X3 404 aa11.71□□□□□ -0.53
TSPAN4-220ENST00000532375 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 A8MV72 311 aaPredicted RBP11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 IFNL4K9M1U5 179 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 FAM20BO75063 409 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 RPP14O95059 124 aaKnown RBP11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 KRT8P05787 483 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 GNAO1P09471 354 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 CCL1P22362 96 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 OR12D2P58182 307 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 TP53I3Q53FA7 332 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 FAM76BQ5HYJ3 339 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 YIPF7Q8N8F6 280 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 LINC01356Q8N9X3 169 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 OR52I1Q8NGK6 324 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 OR14K1Q8NGZ2 314 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 FBLIM1Q8WUP2 373 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 HPSE2Q8WWQ2 592 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 TIMD4Q96H15 378 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 ADI1Q9BV57 179 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 ZNF665Q9H7R5 613 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 MOB1AQ9H8S9 216 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 RNPEPL1Q9HAU8 725 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 UFSP2Q9NUQ7 469 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 V9GYS6 101 aa11.7□□□□□ -0.54
TSPAN4-220ENST00000532375 SNTNA6NMZ2 147 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ZNF850A8MQ14 1090 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 F5H0A9 414 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 H0YAE9 185 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TNFRSF13BO14836 293 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 LMX1BO60663 402 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ZNF205O95201 554 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TGFAP01135 160 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 LHBP01229 141 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ATP6V1B1P15313 513 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 THBS2P35442 1172 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 PSMB10P40306 273 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 KIR3DL2P43630 455 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 MAP2K3P46734 347 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 NANOS3P60323 173 aaKnown RBP11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 BTG1P62324 171 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ACTC1P68032 377 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ACTA1P68133 377 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 RAB40BQ12829 278 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 PRDX4Q13162 271 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TMEM155Q4W5P6 130 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 FDX2Q6P4F2 183 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ZNF826PQ6ZT77 177 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 KCTD20Q7Z5Y7 419 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 LHFPL3Q86UP9 236 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 OR1M1Q8NGA1 313 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 CNIH3Q8TBE1 160 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 OR5P3Q8WZ94 311 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TFAP2CQ92754 450 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 POM121Q96HA1 1249 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 PATZ1Q9HBE1 687 aaKnown RBP11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 ACOXLQ9NUZ1 547 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 TMEM160Q9NX00 188 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 PCDHGB1Q9Y5G3 927 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 MPC1Q9Y5U8 109 aa11.69□□□□□ -0.54
TSPAN4-220ENST00000532375 DAPL1A0PJW8 107 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 B4DSR2 109 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 P2RY10O00398 339 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 CRLF1O75462 422 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 DHRS3O75911 302 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 GRPP07492 148 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 LIMS3P0CW19 117 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 LIMS4P0CW20 117 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 CAPGP40121 348 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 DVL1P1P54792 670 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 IL5RAQ01344 420 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 ZNF154Q13106 437 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 IL18R1Q13478 541 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 GALEQ14376 348 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 BCL2L15Q5TBC7 163 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 ZBTB37Q5TC79 503 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 FAM166AQ6J272 317 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 PEG10Q86TG7 708 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 EGFL6Q8IUX8 553 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 GCSAMQ8N6F7 178 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 OR2G2Q8NGZ5 317 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 PIGCQ92535 297 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 PELI1Q96FA3 418 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 FAM71F1Q96KD3 344 aaPredicted RBP11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 PAPOLGQ9BWT3 736 aaKnown RBP11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 JAM3Q9BX67 310 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 FRRS1LQ9P0K9 344 aa11.68□□□□□ -0.54
TSPAN4-220ENST00000532375 RNF7Q9UBF6 113 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms