RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	PTH2R	P49190	550 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	VSX2	P58304	361 aa	Predicted RBP	4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TAS2R39	P59534	338 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	EFEMP1	Q12805	493 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CRHR2	Q13324	411 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	DEFB115	Q30KQ5	88 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ZBED5	Q49AG3	693 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	WDR82	Q6UXN9	313 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967		Q6ZSV7	163 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	STX19	Q8N4C7	294 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ACOT4	Q8N9L9	421 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	OR8G5	Q8NG78	346 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	OR1K1	Q8NGR3	316 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	COQ8A	Q8NI60	647 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	DNAJC19	Q96DA6	116 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TBX15	Q96SF7	602 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	PFDN5	Q99471	154 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TMED9	Q9BVK6	235 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	PECR	Q9BY49	303 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ESM1	Q9NQ30	184 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	NUDT4	Q9NZJ9	180 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	PPP4R1L	Q9P1A2	415 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ING4	Q9UNL4	249 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ASF1A	Q9Y294	204 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	KLF12	Q9Y4X4	402 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	KDM3B	Q7LBC6	1761 aa		4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	MARF1	Q9Y4F3	1742 aa	Known RBP	4.41	□□□□□ -1.7
ECHDC1-222	ENST00000531967	MYH7B	A7E2Y1	1941 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	MYH2	Q9UKX2	1941 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	RGPD8	O14715	1765 aa	Predicted RBP	4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	PCM1	Q15154	2024 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CENPVL1	A0A0U1RR11	272 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CENPVL3	A0A0U1RRI6	287 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	LYRM9	A8MSI8	78 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	RAMP1	O60894	148 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	DUSP11	O75319	330 aa	Known RBP	4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	OR2B3	O76000	313 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	PVR	P15151	417 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	AKR1C4	P17516	323 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	NR4A1	P22736	598 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CCKAR	P32238	428 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CCR7	P32248	378 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	SRP9	P49458	86 aa	Known RBP	4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TAS2R41	P59536	307 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	OR1Q1	Q15612	314 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	C4orf26	Q17RF5	130 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	FAM27D1	Q5T7N8	215 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	UBE2U	Q5VVX9	321 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ZNF549	Q6P9A3	640 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TRIM40	Q6P9F5	258 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TMEM199	Q8N511	208 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	LINC00301	Q8NCQ3	95 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	GPR32P1	Q8NGA4	272 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	SPATA3	Q8NHX4	192 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	MYEOV	Q96EZ4	313 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	MED8	Q96G25	268 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TCEAL7	Q9BRU2	100 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	CCDC90B	Q9GZT6	254 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	UGT1A8	Q9HAW9	530 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	IL1RAP	Q9NPH3	570 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	TP53TG1	Q9Y2A0	90 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	NWD1	Q149M9	1564 aa		4.4	□□□□□ -1.7
ECHDC1-222	ENST00000531967	ISPD	A4D126	451 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PTTG1	O95997	202 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GABRG2	P18507	467 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SULT1A1	P50225	295 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SULT1A2	P50226	295 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RAB7A	P51149	207 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SNAP25	P60880	206 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GAGE1	Q13065	139 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	KIAA0141	Q14154	515 aa	Predicted RBP	4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TMEM187	Q14656	261 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	PTGR1	Q14914	329 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	EPGN	Q6UW88	154 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OLIG3	Q7RTU3	272 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR9A2	Q8NGT5	310 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR2G2	Q8NGZ5	317 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	EEF1AKMT3	Q96AZ1	226 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	P2RX4	Q99571	388 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	MND1	Q9BWT6	205 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	RBM38	Q9H0Z9	239 aa	Known RBP	4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ELL3	Q9HB65	397 aa	Predicted RBP	4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	BIN3	Q9NQY0	253 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TPSG1	Q9NRR2	321 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TMEM30A	Q9NV96	361 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	FAM206A	Q9NX38	181 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	TAS2R13	Q9NYV9	303 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	OR52A1	Q9UKL2	312 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	C14orf166	Q9Y224	244 aa	Known RBP	4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	GOLT1B	Q9Y3E0	138 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	LTN1	O94822	1766 aa		4.4	□□□□□ -1.71
ECHDC1-222	ENST00000531967	LMO7	Q8WWI1	1683 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CLDN24	A6NM45	220 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967		K7EMT4	169 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	ZNF593	O00488	134 aa	Predicted RBP	4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	NME4	O00746	187 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SPRY3	O43610	288 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	CHP2	O43745	196 aa		4.39	□□□□□ -1.71
ECHDC1-222	ENST00000531967	SCO1	O75880	301 aa		4.39	□□□□□ -1.71

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