RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 SPARTQ8N0X7 666 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF525Q8N782 197 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 BHLHE23Q8NDY6 225 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 OR52N1Q8NH53 320 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 OR51E1Q8TCB6 317 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 C10orf105Q8TEF2 133 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 UBASH3BQ8TF42 649 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 SPRYD4Q8WW59 207 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-206ENST00000531480 ELMOD3Q96FG2 381 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 GPR84Q9NQS5 396 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 PAK1IP1Q9NWT1 392 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-206ENST00000531480 FRRS1LQ9P0K9 344 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 SLC22A13Q9Y226 551 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 NOP16Q9Y3C1 178 aaKnown RBP12.27□□□□□ -0.45
CPSF1-206ENST00000531480 V9GYS6 101 aa12.27□□□□□ -0.45
CPSF1-206ENST00000531480 A0A096LNT2 108 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 TRIM64CA6NLI5 447 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 H0YL77 283 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 J3QLW9 94 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 SPRY3O43610 288 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 DHRS3O75911 302 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF19P17023 458 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 JUNBP17275 347 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-206ENST00000531480 ACHEP22303 614 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 C21orf33P30042 268 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-206ENST00000531480 CD200P41217 278 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 GATA4P43694 442 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 TBCEQ15813 527 aaPredicted RBP12.26□□□□□ -0.45
CPSF1-206ENST00000531480 CCDC58Q4VC31 144 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 SPRNQ5BIV9 151 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 OR2Z1Q8NG97 314 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 RDH5Q92781 318 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 SAP30LQ9HAJ7 183 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 DYSFO75923 2080 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 ZANQ9Y493 2812 aa12.26□□□□□ -0.45
CPSF1-206ENST00000531480 OR4C45A6NMZ5 311 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 E9PI62 339 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
CPSF1-206ENST00000531480 CA6P23280 308 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 TNFSF4P23510 183 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 COL8A2P25067 703 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 PSMB10P40306 273 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 MAP2K3P46734 347 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 TNFAIP6P98066 277 aaPredicted RBP12.25□□□□□ -0.45
CPSF1-206ENST00000531480 MAB21L1Q13394 359 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 ALKBH1Q13686 389 aaKnown RBP12.25□□□□□ -0.45
CPSF1-206ENST00000531480 IRF3Q14653 427 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 TSTQ16762 297 aaKnown RBP12.25□□□□□ -0.45
CPSF1-206ENST00000531480 GFOD2Q3B7J2 385 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 TIMM50Q3ZCQ8 353 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 TMEM42Q69YG0 159 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 CLEC2AQ6UVW9 174 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 DOK3Q7L591 496 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF367Q7RTV3 350 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 FTMTQ8N4E7 242 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 KLHL36Q8N4N3 616 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 SPERTQ8NA61 448 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 OR10AD1Q8NGE0 317 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 FAM168AQ92567 244 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 YIPF5Q969M3 257 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 MEGF10Q96KG7 1140 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 Q96MF0 132 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 EGLN1Q9GZT9 426 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 CHODLQ9H9P2 273 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 DLL4Q9NR61 685 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 DECR2Q9NUI1 292 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 ERVK-18Q9QC07 812 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 CLEC2DQ9UHP7 191 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 MPC1Q9Y5U8 109 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 YLPM1P49750 1951 aaKnown RBP12.25□□□□□ -0.45
CPSF1-206ENST00000531480 CR1P17927 2039 aa12.25□□□□□ -0.45
CPSF1-206ENST00000531480 IGHV1-69-2A0A0G2JMI3 117 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 MTRF1O75570 445 aaKnown RBP12.24□□□□□ -0.45
CPSF1-206ENST00000531480 HLA-DPB1P04440 258 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 HTR1AP08908 422 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 TNFRSF1AP19438 455 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 PDLIM4P50479 330 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 RIPPLY3P57055 190 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 TMEM33P57088 247 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 TAS2R43P59537 309 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF181Q2M3W8 571 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 FAM76BQ5HYJ3 339 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 OR2G6Q5TZ20 316 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 NANOGP1Q8N7R0 232 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 SEMA6DQ8NFY4 1073 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 ERGIC1Q969X5 290 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 C10orf35Q96D05 121 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 ITPKCQ96DU7 683 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 OR2V2Q96R30 315 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 TMUB1Q9BVT8 246 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 ABCB9Q9NP78 766 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 ISYNA1Q9NPH2 558 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 BABAM2Q9NXR7 383 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 RHBDD3Q9Y3P4 386 aa12.24□□□□□ -0.45
CPSF1-206ENST00000531480 IGHV4-30-2A0A087WSY4 118 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ZNF816-ZNF321PA0A0X1KG74 233 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 LOC100289279A0A1B0GTE1 492 aa12.23□□□□□ -0.45
CPSF1-206ENST00000531480 ANKRD30BLA7E2S9 258 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms