RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 PANX1Q96RD7 426 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 SLC38A1Q9H2H9 487 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 MTHFD2LQ9H903 347 aaPredicted RBP5.49□□□□□ -1.53
CSDE1-213ENST00000530784 BTNL2Q9UIR0 455 aa5.49□□□□□ -1.53
CSDE1-213ENST00000530784 A0A096LPI6 279 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 A8MVM7 634 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 VAMP5O95183 116 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 C1QCP02747 245 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 CECR9P0C854 216 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 NCF2P19878 526 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 GTF2E2P29084 291 aaKnown RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 RPL14P50914 215 aaKnown RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 IDH3GP51553 393 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 SH3BGRP55822 239 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 MTCP1P56278 107 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 NME5P56597 212 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ABCE1P61221 599 aaKnown RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 COPZ1P61923 177 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 NAAAQ02083 359 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 LRRC74AQ0VAA2 488 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 LIN52Q52LA3 116 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 C1orf140Q5VVS0 124 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 NIPAL3Q6P499 406 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF836Q6ZNA1 936 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF621Q6ZSS3 439 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 NRARPQ7Z6K4 114 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 TIGD4Q8IY51 512 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 OR4F15Q8NGB8 312 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 OR52P1PQ8NH57 321 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 PNPT1Q8TCS8 783 aaKnown RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 MAGEE2Q8TD90 523 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 SLC26A7Q8TE54 656 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 BCL2L2Q92843 193 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 OR52E6Q96RD3 313 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 OVOL2Q9BRP0 275 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ROPN1BQ9BZX4 212 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 RAB1BQ9H0U4 201 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF442Q9H7R0 627 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 ROPN1Q9HAT0 212 aaPredicted RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 CACYBPQ9HB71 228 aaKnown RBP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 DYNLRB1Q9NP97 96 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 P2RX2Q9UBL9 471 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 PRDM4Q9UKN5 801 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.48□□□□□ -1.53
CSDE1-213ENST00000530784 RASD1Q9Y272 281 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 WIPI2Q9Y4P8 454 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 CUBNO60494 3623 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 DSPPQ9NZW4 1301 aa5.48□□□□□ -1.53
CSDE1-213ENST00000530784 LOC105371242A0A075B767 164 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 LRP5LA4QPB2 252 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 hCG_2039718K7EN88 272 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 RFXANKO14593 260 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 BIRC5O15392 142 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 TCF21O43680 179 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 UPK3AO75631 287 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 AHSA1O95433 338 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 STAMBPO95630 424 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 KRT75O95678 551 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 IGKV3-15P01624 115 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 BCHEP06276 602 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 TFPTP0C1Z6 253 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 GKN3PP0CG01 181 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 NPR2P20594 1047 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 GIFP27352 417 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 CALCRP30988 508 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SRP14P37108 136 aaKnown RBP5.47□□□□□ -1.53
CSDE1-213ENST00000530784 CDKN2CP42773 168 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 CRATP43155 626 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SLC1A6P48664 564 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 NPY4RP50391 375 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 P2RY4P51582 365 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 CRISP3P54108 245 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 NPRL3Q12980 569 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 BNIP2Q12982 314 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ZSWIM7Q19AV6 140 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF774Q6NX45 483 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SPATA21Q7Z572 469 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 VRK2Q86Y07 508 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SVOPLQ8N434 492 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 Q8NFD4 153 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 OR5T2Q8NGG2 359 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 RASL10AQ92737 203 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 TEX37Q96LM6 180 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ANKRD27Q96NW4 1050 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SORT1Q99523 831 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ZBTB18Q99592 522 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 LINC00470Q9BZP3 86 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 C20orf27Q9GZN8 174 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ARMC7Q9H6L4 198 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 MEAF6Q9HAF1 191 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 AIG1Q9NVV5 245 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 CALML5Q9NZT1 146 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ELF5Q9UKW6 265 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ZNF443Q9Y2A4 671 aaPredicted RBP5.47□□□□□ -1.53
CSDE1-213ENST00000530784 SONP18583 2426 aaKnown RBP5.47□□□□□ -1.53
CSDE1-213ENST00000530784 ROS1P08922 2347 aa5.47□□□□□ -1.53
CSDE1-213ENST00000530784 IGHV2OR16-5A0A0B4J2B6 119 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 FTCDNL1E5RQL4 147 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 TM9SF1O15321 606 aa5.46□□□□□ -1.54
CSDE1-213ENST00000530784 RGS16O15492 202 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms