RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CD53P19397 219 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CFL1P23528 166 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PSMA1P25786 263 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GCH1P30793 250 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 KRTAP10-9P60411 292 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 LSM3P62310 102 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 YIF1BQ5BJH7 314 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR56B2PQ8NGI1 322 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GPR148Q8TDV2 347 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MRPL24Q96A35 216 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 DHRS9Q9BPW9 319 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SYT3Q9BQG1 590 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OPA3Q9H6K4 179 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 CCDC59Q9P031 241 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 DUSP13Q9UII6 198 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PURGQ9UJV8 347 aaKnown RBP10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 PMF1-BGLAPU3KQ54 211 aa10.41□□□□□ -0.74
TRAF3IP2-211ENST00000528599 IGLV3-9A0A075B6K5 115 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 TRBV5-5A0A0J9YX44 114 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GGT3PA6NGU5 568 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 A6NIN4 97 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 IGHV3-13P01766 116 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 KITLGP21583 273 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 GABRA5P31644 462 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 APOBEC3AP31941 199 aaPredicted RBP10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SERPINF1P36955 418 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MAP2K3P46734 347 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 SOX2P48431 317 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 KLF3P57682 345 aaPredicted RBP10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 FABP5Q01469 135 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF846Q147U1 533 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR5AS1Q8N127 324 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 MS4A15Q8N5U1 240 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 BHLHE23Q8NDY6 225 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR13C3Q8NGS6 347 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 WDR12Q9GZL7 423 aaKnown RBP10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 OR51E2Q9H255 320 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 HMG20AQ9NP66 347 aa10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 ZNF275Q9NSD4 429 aaPredicted RBP10.4□□□□□ -0.74
TRAF3IP2-211ENST00000528599 IQCF6A8MYZ5 107 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 HS3ST1O14792 307 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 MTRF1O75570 445 aaKnown RBP10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 SC5DO75845 299 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 OCM2P0CE71 109 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 FAHP16930 419 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CRYBB2P43320 205 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 MST1LQ2TV78 715 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ZNF404Q494X3 552 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ACSM3Q53FZ2 586 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 UNQ9370/PRO34162Q6UXP9 181 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TMEM91Q6ZNR0 172 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 SEMA6DQ8NFY4 1073 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TSEN15Q8WW01 171 aaKnown RBP10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 FGGYQ96C11 551 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ADAT3Q96EY9 351 aaPredicted RBP10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TRMT61AQ96FX7 289 aaKnown RBP10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 OR14A2Q96R54 314 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 PLK3Q9H4B4 646 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 PPP1R3EQ9H7J1 279 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 AKIP1Q9NQ31 210 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 STUB1Q9UNE7 303 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 DHDHQ9UQ10 334 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 PIGLQ9Y2B2 252 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 RHBDD3Q9Y3P4 386 aa10.39□□□□□ -0.75
TRAF3IP2-211ENST00000528599 AKAP9Q99996 3911 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 A0A1W2PPK0 400 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 VSTM5A8MXK1 200 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ZNF879B4DU55 563 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 PIN1P1O15428 100 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TIMM8AO60220 97 aaPredicted RBP10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 GPX5O75715 221 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 SELEP16581 610 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ZNF12P17014 697 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 DDOSTP39656 456 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TLE4Q04727 773 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 RIPPLY1Q0D2K3 151 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TRAM1Q15629 374 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 Q499Y3 187 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 FAM27D1Q5T7N8 215 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CD200R1LQ6Q8B3 271 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CCDC54Q8NEL0 328 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 GTF3AQ92664 365 aaKnown RBP10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 FBXW5Q969U6 566 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TMEM106AQ96A25 262 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 ORAI1Q96D31 301 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CHCHD6Q9BRQ6 235 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CENPOQ9BU64 300 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 PPIL3Q9H2H8 161 aaKnown RBP10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 CLEC4MQ9H2X3 399 aaPredicted RBP10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TAAR3PQ9P1P4 343 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 SPG11Q96JI7 2443 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 OTOGQ6ZRI0 2925 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 TRBV5-7A0A0A0MS05 114 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 DHRS7CA6NNS2 312 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 GABRPO00591 440 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 RGS9O75916 674 aaPredicted RBP10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 HLA-DPB1P04440 258 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 GALP22466 123 aa10.38□□□□□ -0.75
TRAF3IP2-211ENST00000528599 MMP15P51511 669 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms