RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ITFG2Q969R8 447 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 ITPKCQ96DU7 683 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 PERPQ96FX8 193 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 OPALINQ96PE5 141 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 FOXC2Q99958 501 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 CXorf56Q9H5V9 222 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 CYSLTR2Q9NS75 346 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 TMEM100Q9NV29 134 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 GPR160Q9UJ42 338 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 ZDHHC8Q9ULC8 765 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 GTF2A1LQ9UNN4 478 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 ERGIC3Q9Y282 383 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 LRCH1Q9Y2L9 728 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 DYSFO75923 2080 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 TANC2Q9HCD6 1990 aa9.12□□□□□ -0.95
NEDD8-205ENST00000527046 IGKV1-9A0A0C4DH69 117 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 TRBV2A0A0J9YWF9 115 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 TRBV5-5A0A0J9YX44 114 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF850A8MQ14 1090 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 PIN1P1O15428 100 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 SYT7O43581 403 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 GMDSO60547 372 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ACHEP22303 614 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 CFL1P23528 166 aaKnown RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 THBS2P35442 1172 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 CD200P41217 278 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 MAP2K3P46734 347 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 CHN2P52757 468 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 GP2P55259 537 aaKnown RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ATP5J2P56134 94 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 SELENOVP59797 346 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 HOXA4Q00056 320 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 BDH1Q02338 343 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 RIPPLY1Q0D2K3 151 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 TPBGQ13641 420 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 INSL4Q14641 139 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 MPPED2Q15777 294 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 TBCEQ15813 527 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 UBE2V2Q15819 145 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 KCTD21Q4G0X4 260 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 TMEM244Q5VVB8 128 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF529Q6P280 563 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 UNQ9370/PRO34162Q6UXP9 181 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 CSNK2A3Q8NEV1 391 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 SEMA6DQ8NFY4 1073 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 OR2Z1Q8NG97 314 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 OR13C5Q8NGS8 318 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ITLN1Q8WWA0 313 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 NEU4Q8WWR8 484 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 OR5P3Q8WZ94 311 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 GHSRQ92847 366 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ORAI1Q96D31 301 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 SMIM19Q96E16 107 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 MRPL48Q96GC5 212 aaKnown RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 MND1Q9BWT6 205 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 DYNLRB1Q9NP97 96 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF275Q9NSD4 429 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 CGGBP1Q9UFW8 167 aaPredicted RBP9.11□□□□□ -0.95
NEDD8-205ENST00000527046 PIGLQ9Y2B2 252 aa9.11□□□□□ -0.95
NEDD8-205ENST00000527046 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 IGKV1-27A0A075B6S5 117 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 A0A096LNT2 108 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 IGHV3-64DA0A0J9YX35 117 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ANKRD61A6NGH8 418 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 TMEM212A6NML5 194 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 DHRS7CA6NNS2 312 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 VWC2LB2RUY7 222 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 SC5DO75845 299 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 INMTO95050 263 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 UBCP0CG48 685 aaKnown RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 CELP19835 753 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 CRYBB2P43320 205 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 GATA4P43694 442 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 TNFAIP6P98066 277 aaPredicted RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 PRDX4Q13162 271 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 RIN1Q13671 783 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 SSX1Q16384 188 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 FAM209AQ5JX71 171 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ZBTB37Q5TC79 503 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 UBE2UQ5VVX9 321 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF773Q6PK81 442 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 PRSS57Q6UWY2 283 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 PARP16Q8N5Y8 322 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF525Q8N782 197 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 WFDC11Q8NEX6 87 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 OR5AK2Q8NH90 309 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 HAVCR2Q8TDQ0 301 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 PIGCQ92535 297 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 FGGYQ96C11 551 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ELMOD3Q96FG2 381 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 TRMT61AQ96FX7 289 aaKnown RBP9.1□□□□□ -0.95
NEDD8-205ENST00000527046 MEGF10Q96KG7 1140 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 OR2V2Q96R30 315 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 DIRC2Q96SL1 478 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 CCDC90BQ9GZT6 254 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 RAB1BQ9H0U4 201 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 ZNF696Q9H7X3 374 aa9.1□□□□□ -0.95
NEDD8-205ENST00000527046 GCM1Q9NP62 436 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms