RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 OR2Z1Q8NG97 314 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 OR56B2PQ8NGI1 322 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 OR52I1Q8NGK6 324 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 OR51F2Q8NH61 342 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 YIPF5Q969M3 257 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 ITFG2Q969R8 447 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 SGK3Q96BR1 496 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 ALG8Q9BVK2 526 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 PBOV1Q9GZY1 135 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 SLC22A4Q9H015 551 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 FGF20Q9NP95 211 aaPredicted RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 ZNF275Q9NSD4 429 aaPredicted RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 TMEM100Q9NV29 134 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 HIF1ANQ9NWT6 349 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 NUFIP1Q9UHK0 495 aaKnown RBP8.58□□□□□ -1.04
VPS28-204ENST00000526054 SNX5Q9Y5X3 404 aa8.58□□□□□ -1.04
VPS28-204ENST00000526054 A0A0U1RQV5 110 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 EFCAB10A6NFE3 127 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 ANKRD30BLA7E2S9 258 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 FAM157AC9JC47 383 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 PPIHO43447 177 aaKnown RBP8.57□□□□□ -1.04
VPS28-204ENST00000526054 FAM20BO75063 409 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 SRSF10O75494 262 aaKnown RBP8.57□□□□□ -1.04
VPS28-204ENST00000526054 MYL12AP19105 171 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 TNFRSF1AP19438 455 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 COL8A2P25067 703 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 DCKP27707 260 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 CCL8P80075 99 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 FAM3AP98173 230 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 MFGE8Q08431 387 aaPredicted RBP8.57□□□□□ -1.04
VPS28-204ENST00000526054 GALEQ14376 348 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 ZNF684Q5T5D7 378 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 C12orf54Q6X4T0 127 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 Q6ZR03 302 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 EGFL6Q8IUX8 553 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 SYS1Q8N2H4 156 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 CSNK2A3Q8NEV1 391 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 NR1H4Q96RI1 486 aaPredicted RBP8.57□□□□□ -1.04
VPS28-204ENST00000526054 SIGLEC11Q96RL6 698 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 SLC30A2Q9BRI3 323 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 JAM3Q9BX67 310 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 ACOXLQ9NUZ1 547 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 ERVK13-1Q9NX77 482 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 TREM2Q9NZC2 230 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 MRPL15Q9P015 296 aaKnown RBP8.57□□□□□ -1.04
VPS28-204ENST00000526054 ZNF319Q9P2F9 582 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 OR52A1Q9UKL2 312 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 MYRFQ9Y2G1 1151 aa8.57□□□□□ -1.04
VPS28-204ENST00000526054 A0A0A6YYJ9 748 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 IGHV1-69-2A0A0G2JMI3 117 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 J3QLW9 94 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 WNT9BO14905 357 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 MTRF1O75570 445 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 RP2O75695 350 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 VENTXO95231 258 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 PNPP00491 289 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 TTRP02766 147 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 HTR1AP08908 422 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 PIPP12273 146 aaPredicted RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 ATP6V1B1P15313 513 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 ZNF19P17023 458 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 GNALP38405 381 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 MAP2K3P46734 347 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 SRP9P49458 86 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 GSK3AP49840 483 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 TMEM33P57088 247 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 ACTG1P63261 375 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 CSNK2BP67870 215 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 MZT1Q08AG7 82 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 MRPL28Q13084 256 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 OR8G1Q15617 311 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 OR8B8Q15620 311 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 LHFPL3Q86UP9 236 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 KLBQ86Z14 1044 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 ELMOD2Q8IZ81 293 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 SEMA6DQ8NFY4 1073 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 OR10AD1Q8NGE0 317 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 HAVCR2Q8TDQ0 301 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 TMEM80Q96HE8 168 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 C4orf36Q96KX1 117 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 ADAT1Q9BUB4 502 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 ABCB9Q9NP78 766 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 G6PC2Q9NQR9 355 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 GPR84Q9NQS5 396 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 PLCXD1Q9NUJ7 323 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 CHCHD3Q9NX63 227 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 CNOT2Q9NZN8 540 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 IL19Q9UHD0 177 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 DIMT1Q9UNQ2 313 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 EXOSC1Q9Y3B2 195 aaKnown RBP8.56□□□□□ -1.04
VPS28-204ENST00000526054 DYSFO75923 2080 aa8.56□□□□□ -1.04
VPS28-204ENST00000526054 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
VPS28-204ENST00000526054 A0A1B0GVI7 797 aa8.55□□□□□ -1.04
VPS28-204ENST00000526054 A0A1B0GWJ7 208 aa8.55□□□□□ -1.04
VPS28-204ENST00000526054 ANXA2P2A6NMY6 339 aa8.55□□□□□ -1.04
VPS28-204ENST00000526054 MLNRO43193 412 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms