RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 P2RY10O00398 339 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 NCR1O76036 304 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 HPXP02790 462 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 TNFRSF1AP19438 455 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 CD200P41217 278 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 TNFAIP6P98066 277 aaPredicted RBP17.62■□□□□ 0.41
CD44-222ENST00000526025 MZT1Q08AG7 82 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 TSTQ16762 297 aaKnown RBP17.62■□□□□ 0.41
CD44-222ENST00000526025 OR14K1Q8NGZ2 314 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 RDH5Q92781 318 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 SOX7Q9BT81 388 aa17.62■□□□□ 0.41
CD44-222ENST00000526025 DYSFO75923 2080 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 LOC107986453A0A1B0GWG9 222 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 E9PI62 339 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 NDUFS8O00217 210 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 OGG1O15527 345 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 SYT7O43581 403 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 SSX4O60224 188 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 PTBP3O95758 552 aaKnown RBP17.61■□□□□ 0.41
CD44-222ENST00000526025 DAOP14920 347 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 ACHEP22303 614 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 CA6P23280 308 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 CRYBB2P43320 205 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 SRP9P49458 86 aaKnown RBP17.61■□□□□ 0.41
CD44-222ENST00000526025 CCL8P80075 99 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 BDH1Q02338 343 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 ACSM1Q08AH1 577 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 CDK5R1Q15078 307 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 OR8G1Q15617 311 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 CLEC2AQ6UVW9 174 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 SPNS3Q6ZMD2 512 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 FAM71F1Q96KD3 344 aaPredicted RBP17.61■□□□□ 0.41
CD44-222ENST00000526025 ADAT1Q9BUB4 502 aaKnown RBP17.61■□□□□ 0.41
CD44-222ENST00000526025 DLL4Q9NR61 685 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 ERVK-18Q9QC07 812 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 ENPP5Q9UJA9 477 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 ITPR3Q14573 2671 aa17.61■□□□□ 0.41
CD44-222ENST00000526025 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.6■□□□□ 0.41
CD44-222ENST00000526025 GNALP38405 381 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 GATA4P43694 442 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 PDLIM4P50479 330 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 TMEM42Q69YG0 159 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 OR10AD1Q8NGE0 317 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 GATAD2BQ8WXI9 593 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 ERGIC1Q969X5 290 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 PAPOLGQ9BWT3 736 aaKnown RBP17.6■□□□□ 0.41
CD44-222ENST00000526025 COMMD4Q9H0A8 199 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 HHLA2Q9UM44 414 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 LSM2Q9Y333 95 aaKnown RBP17.6■□□□□ 0.41
CD44-222ENST00000526025 RHBDD3Q9Y3P4 386 aa17.6■□□□□ 0.41
CD44-222ENST00000526025 MAP1AP78559 2803 aaPredicted RBP17.6■□□□□ 0.41
CD44-222ENST00000526025 IGHV1-69-2A0A0G2JMI3 117 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 TRBV2A0A0J9YWF9 115 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 ANXA2P2A6NMY6 339 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 IFNL4K9M1U5 179 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 TPD52L2O43399 206 aaKnown RBP17.59■□□□□ 0.41
CD44-222ENST00000526025 ZFPL1O95159 310 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 CD1AP06126 327 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 GIFP27352 417 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 CLEC12BQ2HXU8 276 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 ZNF676Q8N7Q3 588 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 OR5AK2Q8NH90 309 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 SGCDQ92629 289 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 SMIM19Q96E16 107 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 MEGF10Q96KG7 1140 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 OR2V2Q96R30 315 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 CHODLQ9H9P2 273 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 C14orf119Q9NWQ9 140 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 ITGB1BP2Q9UKP3 347 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 PIGLQ9Y2B2 252 aa17.59■□□□□ 0.41
CD44-222ENST00000526025 F5H5P2 479 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 H0YL77 283 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 RP2O75695 350 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 LY6HO94772 140 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 LALBAP00709 142 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 MT-ND2P03891 347 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 HLA-DPB1P04440 258 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 GTF2A1P52655 376 aaPredicted RBP17.58■□□□□ 0.4
CD44-222ENST00000526025 CDH15P55291 814 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 PRDX4Q13162 271 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 TBCEQ15813 527 aaPredicted RBP17.58■□□□□ 0.4
CD44-222ENST00000526025 ODF4Q2M2E3 257 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 DMKNQ6E0U4 476 aaPredicted RBP17.58■□□□□ 0.4
CD44-222ENST00000526025 ZNF525Q8N782 197 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 OR8S1Q8NH09 359 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 ITLN1Q8WWA0 313 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 FAM168AQ92567 244 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 ITPKCQ96DU7 683 aa17.58■□□□□ 0.4
CD44-222ENST00000526025 VPS13CQ709C8 3753 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 TRIM64A6NGJ6 449 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 FAHP16930 419 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 EEF1B2P24534 225 aaKnown RBP17.57■□□□□ 0.4
CD44-222ENST00000526025 TMEM33P57088 247 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 MAB21L1Q13394 359 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 SPHARQ15513 63 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 ZNF181Q2M3W8 571 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 CLVS2Q5SYC1 327 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 XAF1Q6GPH4 301 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 ZDHHC23Q8IYP9 409 aa17.57■□□□□ 0.4
CD44-222ENST00000526025 C10orf105Q8TEF2 133 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms