RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 C12orf71A8MTZ7 269 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 TPD52L2O43399 206 aaKnown RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 SPRY3O43610 288 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PRKYO43930 277 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 TXNDC12O95881 172 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 NGFP01138 241 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 IFNGP01579 166 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 SERPINA5P05154 406 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CST2P09228 141 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ZNF823P16415 610 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 NPR2P20594 1047 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 GSTM3P21266 225 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CRABP1P29762 137 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 GRK5P34947 590 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 SERPINF1P36955 418 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 MAGEB1P43366 347 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PCYT1AP49585 367 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PRKXP51817 358 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ARHGDIAP52565 204 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 HCCSP53701 268 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ACTR3P61158 418 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 SCRN3Q0VDG4 424 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 AQP6Q13520 282 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 APOFQ13790 326 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 EIF2B1Q14232 305 aaKnown RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 RCN1Q15293 331 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 SNAPC1Q16533 368 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ZSCAN26Q16670 478 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 TSTQ16762 297 aaKnown RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 CLEC12BQ2HXU8 276 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CCDC92Q53HC0 331 aaPredicted RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 C11orf71Q6IPW1 123 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 RPL13AP3Q6NVV1 102 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 SLC27A4Q6P1M0 643 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PLEKHG7Q6ZR37 379 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 DCXRQ7Z4W1 244 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 LURAP1LQ8IV03 231 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CPOQ8IVL8 374 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CBR4Q8N4T8 237 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 LINC00471Q8N535 108 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PAPD5Q8NDF8 572 aaKnown RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 SLC26A10Q8NG04 563 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 OR10AD1Q8NGE0 317 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 OR52L2PQ8NGH6 319 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 OR2AE1Q8NHA4 323 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 FAM81AQ8TBF8 368 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 STMN2Q93045 179 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PIGTQ969N2 578 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ZNF75AQ96N20 296 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 AMELYQ99218 206 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 COPS4Q9BT78 406 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 OR2J1Q9GZK6 312 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 RACGAP1Q9H0H5 632 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CENPMQ9NSP4 180 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CBLN4Q9NTU7 201 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 BEX4Q9NWD9 120 aaPredicted RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 TAAR3PQ9P1P4 343 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 KLHL21Q9UJP4 597 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 PRDM4Q9UKN5 801 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 GTF2A1LQ9UNN4 478 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 KLHDC2Q9Y2U9 406 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CMAHPQ9Y471 501 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 ABCA2Q9BZC7 2435 aa4.38□□□□□ -1.71
SVIP-202ENST00000525670 CHD3Q12873 2000 aaKnown RBP4.38□□□□□ -1.71
SVIP-202ENST00000525670 SONP18583 2426 aaKnown RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 CSPG4Q6UVK1 2322 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 CCDC182A6NF36 153 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 CENPBD1B2RD01 187 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 M0R233 179 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ARPC3O15145 178 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 SURF4O15260 269 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 MAGEB4O15481 346 aaPredicted RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 SYNGR3O43761 229 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 TIMM8AO60220 97 aaPredicted RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 GOSR1O95249 250 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 FCGR1AP12314 374 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ZNF35P13682 527 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ANXA8P13928 327 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 SELEP16581 610 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 PAICSP22234 425 aaKnown RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 GCH1P30793 250 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ENTPD1P49961 510 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ZNF133P52736 654 aaPredicted RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 CRISP1P54107 249 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 P2RX3P56373 397 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 KLF3P57682 345 aaPredicted RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 PCBD1P61457 104 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 PPP1CBP62140 327 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 TNK1Q13470 666 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 GGTLC2Q14390 218 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 PTGES3Q15185 160 aaKnown RBP4.37□□□□□ -1.71
SVIP-202ENST00000525670 RAB35Q15286 201 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 TAF13Q15543 124 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 TRIP10Q15642 601 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 SNAI3Q3KNW1 292 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ZNF585BQ52M93 769 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 SPRNQ5BIV9 151 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 ELFN2Q5R3F8 820 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 AVPI1Q5T686 147 aa4.37□□□□□ -1.71
SVIP-202ENST00000525670 FAM27BQ5VT28 67 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms