RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 RPEL1Q2QD12 228 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 RWDD4Q6NW29 188 aaKnown RBP2.15□□□□□ -2.07
PCM1-219ENST00000523540 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 CDS1Q92903 461 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 AGMATQ9BSE5 352 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 THADAQ6YHU6 1953 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 MROH7Q68CQ1 1323 aa2.15□□□□□ -2.07
PCM1-219ENST00000523540 SIGLEC1Q9BZZ2 1709 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 SVILO95425 2214 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 LTBP4Q8N2S1 1624 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 CCL15-CCL14A0A0B4J2E2 113 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 MFNGO00587 321 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 ZBTB5O15062 677 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 OR7C2O60412 319 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 CTNSO60931 367 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 KRT16P08779 473 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 P0C880 135 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 CD28P10747 220 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 NELFEP18615 380 aaKnown RBP2.14□□□□□ -2.07
PCM1-219ENST00000523540 GALP22466 123 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 APLNRP35414 380 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 RPS5P46782 204 aaKnown RBP2.14□□□□□ -2.07
PCM1-219ENST00000523540 AP1S2P56377 157 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 TAS2R43P59537 309 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 OR2B8PP59922 312 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 KDSRQ06136 332 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 RAD51Q06609 339 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 IL18Q14116 193 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 TFDP2Q14188 446 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 CCL15Q16663 113 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 SPIN3Q5JUX0 258 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 MFSD14CQ5VZR4 134 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 TMEM236Q5W0B7 351 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 UNC93AQ86WB7 457 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 ZNF680Q8NEM1 530 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 OR2Z1Q8NG97 314 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 ITFG1Q8TB96 612 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 FAM19A4Q96LR4 140 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 EMC6Q9BV81 110 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 TREX1Q9NSU2 369 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 TAS2R5Q9NYW4 299 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 C2orf16Q68DN1 1984 aa2.14□□□□□ -2.07
PCM1-219ENST00000523540 LOXHD1Q8IVV2 1947 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 TRAV25A0A0B4J276 109 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 IGKV2-24A0A0C4DH68 120 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 A0A1W2PRD5 423 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 PRAMEF26H0Y7S4 382 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 XRCC2O43543 280 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 SLC19A2O60779 497 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 CNMDO75829 334 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 ASGR1P07306 291 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 OR1G1P47890 313 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 CLDN18P56856 261 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 MEF2BQ02080 365 aaPredicted RBP2.13□□□□□ -2.07
PCM1-219ENST00000523540 GABRA6Q16445 453 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 TAF9Q16594 264 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 SP6Q3SY56 376 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 C6orf99Q4VX62 202 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 KDM4DQ6B0I6 523 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 TBPL2Q6SJ96 375 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 Q6ZSR6 202 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 FAM122BQ7Z309 247 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 RAB43Q86YS6 212 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 ZNF547Q8IVP9 402 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 MICU2Q8IYU8 434 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 TVP23CQ96ET8 276 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 C9orf72Q96LT7 481 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 SHANK2-AS3Q9BTD1 123 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 C1orf50Q9BV19 199 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 SFXN3Q9BWM7 321 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 CD209Q9NNX6 404 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 DYRK4Q9NR20 520 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 IL37Q9NZH6 218 aa2.13□□□□□ -2.07
PCM1-219ENST00000523540 ZSWIM8A7E2V4 1837 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 KIR2DS1A0A191URI9 304 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 LRRIQ4A6NIV6 560 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.12□□□□□ -2.07
PCM1-219ENST00000523540 PSPHP1O15172 72 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 SCO1O75880 301 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 ZNF235Q14590 738 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 OR1Q1Q15612 314 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 KATNAL2Q8IYT4 538 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 SLC25A29Q8N8R3 303 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 LRRC75AQ8NAA5 344 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 ASZ1Q8WWH4 475 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 S100PBPQ96BU1 408 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 MTG1Q9BT17 334 aaPredicted RBP2.12□□□□□ -2.07
PCM1-219ENST00000523540 VPS37BQ9H9H4 285 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 MCUBQ9NWR8 336 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 ZNF391Q9UJN7 358 aa2.12□□□□□ -2.07
PCM1-219ENST00000523540 CAB39Q9Y376 341 aaPredicted RBP2.12□□□□□ -2.07
PCM1-219ENST00000523540 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 CENPBD1B2RD01 187 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 CASQ2O14958 399 aaPredicted RBP2.11□□□□□ -2.07
PCM1-219ENST00000523540 FGF4P08620 206 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 THRAP10827 490 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 CXCR1P25024 350 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 GALR1P47211 349 aa2.11□□□□□ -2.07
PCM1-219ENST00000523540 HADHQ16836 314 aaKnown RBP2.11□□□□□ -2.07
PCM1-219ENST00000523540 OR2T5Q6IEZ7 315 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms