RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SLC16A11Q8NCK7 471 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 OR6N2Q8NGY6 317 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 OR51F2Q8NH61 342 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 SLC25A43Q8WUT9 341 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 C2orf50Q96LR7 162 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF587Q96SQ5 575 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 SRA1Q9HD15 236 aaKnown RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 IL36AQ9UHA7 158 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 OR52A1Q9UKL2 312 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 GAB2Q9UQC2 676 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 YIPF1Q9Y548 306 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 THADAQ6YHU6 1953 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 A0A087WV48 116 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 CENPVL1A0A0U1RR11 272 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 LEFTY2O00292 366 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 PIAS2O75928 621 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ALOX5APP20292 161 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 FPR2P25090 351 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 GDI1P31150 447 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ALDH3B1P43353 468 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 PMPCAQ10713 525 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 RNPS1Q15287 305 aaKnown RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 GLYATL3Q5SZD4 288 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 GALNTL5Q7Z4T8 443 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ADGRE4PQ86SQ3 457 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 TGIF2LYQ8IUE0 185 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ZCCHC10Q8TBK6 192 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 IFI44Q8TCB0 444 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 RAB39BQ96DA2 213 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 TM4SF19Q96DZ7 209 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 HHIPL1Q96JK4 782 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 C1orf147Q96MC9 270 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 ALG12Q9BV10 488 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 GSX1Q9H4S2 264 aaPredicted RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 C5orf66Q9H5L9 145 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 CBLN4Q9NTU7 201 aa7.45□□□□□ -1.22
CSMD1-213ENST00000523488 MRPS23Q9Y3D9 190 aaKnown RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 LSM5Q9Y4Y9 91 aaKnown RBP7.45□□□□□ -1.22
CSMD1-213ENST00000523488 A0A1W2PN81 502 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 KNG1P01042 644 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CHRNA7P36544 502 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 DNASE1L1P49184 302 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 BPIFB3P59826 476 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 RBX1P62877 108 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CSNK1G2P78368 415 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 ENPP2Q13822 863 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CHRFAM7AQ494W8 412 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 C1orf194Q5T5A4 169 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MRPL2Q5T653 305 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 LEG1Q6P5S2 330 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 ABHD17CQ6PCB6 329 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MRPL41Q8IXM3 137 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 FAM213BQ8TBF2 198 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 C8orf44Q96CB5 159 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM208Q9BTX3 173 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 LMF2Q9BU23 707 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 OR2AG1Q9H205 316 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 RNF186Q9NXI6 227 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 VAX2Q9UIW0 290 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TNRC6BQ9UPQ9 1833 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TGIF2-C20orf24A0A0A6YYL0 155 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MED19A0JLT2 244 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CBR3O75828 277 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 HLA-DQA2P01906 255 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 HSPB1P04792 205 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 PCCBP05166 539 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 RPLP1P05386 114 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MMP7P09237 267 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM225BP0DP42 221 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 BCL6P41182 706 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 P2RY1P47900 373 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 AADACL3Q5VUY0 350 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CST9Q5W186 159 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 FJX1Q86VR8 437 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 ZNF761Q86XN6 746 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 C1orf87Q8N0U7 546 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 OR10AC1Q8NH08 325 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 NUDT9Q9BW91 350 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 GPR87Q9BY21 358 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 MKKSQ9NPJ1 570 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 DNAJB12Q9NXW2 375 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 FBXL17Q9UF56 701 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 C19orf53Q9UNZ5 99 aaPredicted RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TMEM14DPA8MWL7 114 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 H0YL77 283 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 NSA2O95478 260 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 SCGB1D1O95968 90 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 TK1P04183 234 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 OR5H8P0DN80 308 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 HRH1P35367 487 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 APOBEC1P41238 236 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 CLDN6P56747 220 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 ERVFRD-1P60508 538 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 RPS20P60866 119 aaKnown RBP7.44□□□□□ -1.22
CSMD1-213ENST00000523488 BTNL3Q6UXE8 466 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 SLC35D2Q76EJ3 337 aa7.44□□□□□ -1.22
CSMD1-213ENST00000523488 SLC16A14Q7RTX9 510 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms