RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 TAS2R5Q9NYW4 299 aa11.64□□□□□ -0.55
PCDHGB1-201ENST00000523390 MTCL1Q9Y4B5 1905 aaKnown RBP11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 MGAMO43451 1857 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 C17orf51A8MQB3 221 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 C21orf140B9A014 251 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 HSD17B6O14756 317 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 CLDN20P56880 219 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 LINC00303Q3SY05 128 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 LIN37Q96GY3 246 aaPredicted RBP11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 WDFY2Q96P53 400 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 TRAPPC4Q9Y296 219 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 B4E171 279 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 SCO1O75880 301 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 ACSM4P0C7M7 580 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 NFYBP25208 207 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 TSPAN7P41732 249 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 MMP15P51511 669 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 MSMO1Q15800 293 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 FHL5Q5TD97 284 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 DECR2Q9NUI1 292 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 FRRS1LQ9P0K9 344 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 MPPED1O15442 326 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 NXPH3O95157 252 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 ZNF718Q3SXZ3 478 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 TSEN54Q7Z6J9 526 aaKnown RBP11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR52N4Q8NGI2 321 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 RNF32Q9H0A6 362 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 KCNK15Q9H427 330 aa11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 FNDC1Q4ZHG4 1894 aaPredicted RBP11.63□□□□□ -0.55
PCDHGB1-201ENST00000523390 GPR137BO60478 399 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 LIMS1P48059 325 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 CRYBA2P53672 197 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 KISS1Q15726 138 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR52W1Q6IF63 320 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ABHD3Q8WU67 409 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SULT4A1Q9BR01 284 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 POLEQ07864 2286 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 F8W036 122 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OGG1O15527 345 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 FADS1O60427 444 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 LYZL6O75951 148 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 TRAPPC2P0DI81 140 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 TRAPPC2BP0DI82 140 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 LIFP15018 202 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 BLOC1S1P78537 153 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 MGAT2Q10469 447 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 LSRQ86X29 649 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 CDC20BQ86Y33 519 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 DMBX1Q8NFW5 382 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ZC3H10Q96K80 434 aaKnown RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 TINAGL1Q9GZM7 467 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ZNF71Q9NQZ8 489 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ZNF275Q9NSD4 429 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 ATP23Q9Y6H3 246 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 A0A0D9SG52 128 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 GLSO94925 669 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 PPP3CBP16298 524 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 IL11P20809 199 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 PTAFRP25105 342 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 GPM6AP51674 278 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 IFITM2Q01629 132 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR2T2Q6IF00 324 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 GFRALQ6UXV0 394 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 DPPA2Q7Z7J5 298 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SEH1LQ96EE3 360 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 PBDC1Q9BVG4 233 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 HRH4Q9H3N8 390 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 HS3ST3B1Q9Y662 390 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR4C45A6NMZ5 311 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 WDR1O75083 606 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 IGLV3-19P01714 112 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 NDUFB7P17568 137 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SPINK2P20155 84 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 TUBG1P23258 451 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 GLRA1P23415 457 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 MLF1P58340 268 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 C20orf196Q8IYI0 205 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 LGI3Q8N145 548 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR52B4Q8NGK2 314 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SLAMF9Q96A28 289 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SDSLQ96GA7 329 aa11.62□□□□□ -0.55
PCDHGB1-201ENST00000523390 SPTBN1Q01082 2364 aaKnown RBP11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 MEIKINA0A087WXM9 373 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 GSTP1P09211 210 aaKnown RBP11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 SP9P0CG40 484 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 FGF5P12034 268 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR5T1Q8NG75 326 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 OR10J5Q8NHC4 309 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 SIRT4Q9Y6E7 314 aaPredicted RBP11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 DSPPQ9NZW4 1301 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 RNF212BA8MTL3 300 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 SPINT2O43291 252 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 DHRS3O75911 302 aa11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 CRYABP02511 175 aaKnown RBP11.61□□□□□ -0.55
PCDHGB1-201ENST00000523390 SELEP16581 610 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms