RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 KLHDC2Q9Y2U9 406 aa13.51□□□□□ -0.25
CLN8-206ENST00000523237 RHBDD3Q9Y3P4 386 aa13.51□□□□□ -0.25
CLN8-206ENST00000523237 LRP12Q9Y561 859 aa13.51□□□□□ -0.25
CLN8-206ENST00000523237 TRAV40A0A0B4J280 105 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 LHBP01229 141 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
CLN8-206ENST00000523237 ESRRGP62508 458 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 IL5RAQ01344 420 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 PTGES3Q15185 160 aaKnown RBP13.5□□□□□ -0.25
CLN8-206ENST00000523237 ATP6AP1Q15904 470 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 LCN1P1Q5VSP4 162 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 BCL6BQ8N143 479 aaPredicted RBP13.5□□□□□ -0.25
CLN8-206ENST00000523237 TEAD3Q99594 435 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 ABCB9Q9NP78 766 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 KRT84Q9NSB2 600 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 MPC1Q9Y5U8 109 aa13.5□□□□□ -0.25
CLN8-206ENST00000523237 C22orf46C9J442 243 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 G3V2T6 193 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 TNFRSF13BO14836 293 aaPredicted RBP13.49□□□□□ -0.25
CLN8-206ENST00000523237 PLATP00750 562 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 GYPAP02724 150 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 LIPFP07098 398 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 IGHV4-38-2P0DP08 117 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 MTNR1AP48039 350 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 FGF12P61328 243 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 MICBQ29980 383 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 TEX36Q5VZQ5 186 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 C9orf139Q6ZV77 190 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 FAM90A1Q86YD7 464 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 C11orf53Q8IXP5 236 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 GALNT4Q8N4A0 578 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 OR8B12Q8NGG6 310 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 LRRC29Q8WV35 223 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 ITPKCQ96DU7 683 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 MICU1Q9BPX6 476 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 RTL8AQ9BWD3 113 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 MROQ9BYG7 248 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 PPP1R3EQ9H7J1 279 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 ZMAT3Q9HA38 289 aaKnown RBP13.49□□□□□ -0.25
CLN8-206ENST00000523237 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
CLN8-206ENST00000523237 IGHV3OR16-10A0A075B7F0 116 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 CCDC182A6NF36 153 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 DNAJC9-AS1A6NH13 148 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 CST4P01036 141 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 MRPL3P09001 348 aaKnown RBP13.48□□□□□ -0.25
CLN8-206ENST00000523237 MUC1P15941 1255 aaPredicted RBP13.48□□□□□ -0.25
CLN8-206ENST00000523237 EGR1P18146 543 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 PRTN3P24158 256 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 ACKR3P25106 362 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 FASP25445 335 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 CFPP27918 469 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 CFHR2P36980 270 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 HCCSP53701 268 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 CSNK2BP67870 215 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 BAMBIQ13145 260 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 PRDX4Q13162 271 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 C1orf146Q5VVC0 180 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 WDR82Q6UXN9 313 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 ZDHHC13Q8IUH4 622 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
CLN8-206ENST00000523237 ASB17Q8WXJ9 295 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 LYZL4Q96KX0 146 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 ZNF48Q96MX3 618 aaPredicted RBP13.48□□□□□ -0.25
CLN8-206ENST00000523237 TLNRD1Q9H1K6 362 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 SMURF1Q9HCE7 757 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 KAAG1Q9UBP8 84 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 AP4S1Q9Y587 144 aa13.48□□□□□ -0.25
CLN8-206ENST00000523237 TENM1Q9UKZ4 2725 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 IGHV3OR15-7A0A075B7D8 119 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 TMEM269A0A1B0GVZ9 245 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 ACOD1A6NK06 481 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 TMEM210A6NLX4 147 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 ZNF850A8MQ14 1090 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 CDIPTO14735 213 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 TMPRSS2O15393 492 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 PRKYO43930 277 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 ZNF254O75437 659 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 FCGR1AP12314 374 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 C11orf91Q3C1V1 193 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 GPR157Q5UAW9 335 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 ZNF679Q8IYX0 411 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 C3orf56Q8N813 242 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 FAM81AQ8TBF8 368 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 OR5P3Q8WZ94 311 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 PIGCQ92535 297 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 ITFG2Q969R8 447 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 DUX5Q96PT3 197 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 CNN2Q99439 309 aaKnown RBP13.47□□□□□ -0.25
CLN8-206ENST00000523237 PKP2Q99959 881 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 PCGF1Q9BSM1 259 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 RASSF4Q9H2L5 321 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 FAM206AQ9NX38 181 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 H2AFY2Q9P0M6 372 aaPredicted RBP13.47□□□□□ -0.25
CLN8-206ENST00000523237 ENOPH1Q9UHY7 261 aa13.47□□□□□ -0.25
CLN8-206ENST00000523237 A0A0U1RQV5 110 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 SLC22A31A6NKX4 558 aa13.46□□□□□ -0.25
CLN8-206ENST00000523237 ZAR1LA6NP61 321 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms