RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 GPR37O15354 613 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 OR2F2O95006 317 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 OR5G3P0C626 314 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 OR2F1Q13607 317 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 DEGS2Q6QHC5 323 aa14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 PINX1Q96BK5 328 aaKnown RBP14.57□□□□□ -0.08
PCDHA3-201ENST00000522353 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 FLI1Q01543 452 aaPredicted RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 TCTN1Q2MV58 587 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 FAM122BQ7Z309 247 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 NPEPL1Q8NDH3 523 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 GNPNAT1Q96EK6 184 aaPredicted RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 FBXO8Q9NRD0 319 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 SIGLEC7Q9Y286 467 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PRR35P0CG20 571 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 GLI4P10075 376 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 SOX18P35713 384 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 YBX1P67809 324 aaKnown RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PNLIPRP3Q17RR3 467 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 TMEM268Q5VZI3 342 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 C17orf107Q6ZR85 190 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PLA2G12AQ9BZM1 189 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 SLC26A1Q9H2B4 701 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 ONECUT1Q9UBC0 465 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 FOXJ3Q9UPW0 622 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 LRP12Q9Y561 859 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PCYT1BQ9Y5K3 369 aaPredicted RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 JTBO76095 146 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 OR2T2Q6IF00 324 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 MOB1BQ7L9L4 216 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 CMTM3Q96MX0 182 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 FYTTD1Q96QD9 318 aaKnown RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 NMES1Q9C002 83 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 STRAPQ9Y3F4 350 aaKnown RBP14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 TXNL1O43396 289 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 M6PRP20645 277 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PPP1CAP62136 330 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 PMS2CLQ68D20 193 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 SFT2D1Q8WV19 159 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 AMDHD2Q9Y303 409 aa14.56□□□□□ -0.08
PCDHA3-201ENST00000522353 TEX51A0A1B0GUA7 166 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 RAE1P78406 368 aaKnown RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 KDF1Q8NAX2 398 aaPredicted RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 RASL10BQ96S79 203 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 CCSO14618 274 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 DTYMKP23919 212 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 TNFAIP6P98066 277 aaPredicted RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 FABP5Q01469 135 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF141Q15928 474 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 PABPC1L2AQ5JQF8 200 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 SPINK14Q6IE38 97 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF439Q8NDP4 499 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 HES4Q9HCC6 221 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 LYZL6O75951 148 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 C1QBP02746 253 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF32P17041 273 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ELLP55199 621 aaPredicted RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 RPEQ96AT9 228 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 PIGMQ9H3S5 423 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 RNF167Q9H6Y7 350 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 PATE3B3GLJ2 98 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 H2AFB1P0C5Y9 115 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 SSBP1Q04837 148 aaKnown RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ADIRFQ15847 76 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 OTPQ5XKR4 325 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 CALHM3Q86XJ0 350 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 ADPRHL1Q8NDY3 354 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 OR13C5Q8NGS8 318 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 PRR7Q8TB68 274 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 MITD1Q8WV92 249 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 DDOQ99489 341 aa14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 PATZ1Q9HBE1 687 aaKnown RBP14.55□□□□□ -0.08
PCDHA3-201ENST00000522353 NUDT19A8MXV4 375 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 EVX1P49640 407 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 ZIC1Q15915 447 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 STPG1Q5TH74 334 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 SFTPA1Q8IWL2 248 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 CCL17Q92583 94 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 EXTL1Q92935 676 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 EID2BQ96D98 161 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 RNF150Q9ULK6 438 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 AQP7P3A6NL99 342 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 ZFP92A6NM28 416 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 ZNF354AO60765 605 aaPredicted RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 SPNS2Q8IVW8 549 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 CHST6Q9GZX3 395 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 RNF32Q9H0A6 362 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 DVL1O14640 695 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 DVL1P1P54792 670 aaPredicted RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 KCNRGQ8N5I3 272 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 AMER3Q8N944 861 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 NARFLQ9H6Q4 476 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 ARPC4-TTLL3A0A0A6YYG9 625 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 IGHV5-10-1A0A0J9YXX1 117 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 NCBP2LA6PVI3 153 aaKnown RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 EPPINO95925 133 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 UBE2IP63279 158 aaKnown RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 B3GNTL1Q67FW5 361 aaPredicted RBP14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 TRAT1Q6PIZ9 186 aa14.54□□□□□ -0.08
PCDHA3-201ENST00000522353 DYNC2LI1Q8TCX1 351 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms