RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 STK38LQ9Y2H1 464 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 TMED3Q9Y3Q3 217 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 MAD1L1Q9Y6D9 718 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 COMMD3-BMI1R4GMX3 469 aa3.04□□□□□ -1.92
VPS13B-208ENST00000521037 SRRM2Q9UQ35 2752 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 A0A0U1RRA0 63 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 SMIM31A0A1B0GVY4 71 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 NCF1BA6NI72 391 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZSCAN5BA6NJL1 495 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CEACAM18A8MTB9 384 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 NCF1CA8MVU1 366 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CLDN25C9JDP6 229 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 FOXE1O00358 373 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 DNALI1O14645 258 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 GYG2O15488 501 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 LANCL1O43813 399 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TYROBPO43914 113 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CHST1O43916 411 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TBX19O60806 448 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 FKBP6O75344 327 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 MRPL33O75394 65 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 STK16O75716 305 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF189O75820 626 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CIB2O75838 187 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 SEMA3DO95025 777 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 MFN2O95140 757 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ERCC1P07992 297 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 IGHV4-30-4P0DP06 118 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ACP2P11117 423 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 STIP1P31948 543 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CFHR2P36980 270 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 EIF1P41567 113 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 OR3A3P47888 321 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 PSPHP78330 225 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 IRF8Q02556 426 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 HSF2Q03933 536 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 DLG1Q12959 904 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 SELENBP1Q13228 472 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 RBMS2Q15434 407 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ODF4Q2M2E3 257 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 SLC36A3Q495N2 470 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TMEM155Q4W5P6 130 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CDKL4Q5MAI5 379 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 PHYHD1Q5SRE7 291 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 OTUD3Q5T2D3 398 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 WBP2NLQ6ICG8 309 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 OR4A47Q6IF82 309 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TYW3Q6IPR3 259 aaKnown RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 FAM159AQ6UWV7 190 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 FRRS1Q6ZNA5 592 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CALHM3Q86XJ0 350 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 PTOV1Q86YD1 416 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 EGFL6Q8IUX8 553 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 MISPQ8IVT2 679 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF101Q8IZC7 436 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 GBGT1Q8N5D6 347 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF283Q8N7M2 679 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 DRAXINQ8NBI3 349 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ATP6V1C2Q8NEY4 427 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 OR4S1Q8NGB4 309 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 MIPOL1Q8TD10 442 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 UBTD2Q8WUN7 234 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 C17orf50Q8WW18 174 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 MCUR1Q96AQ8 359 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 NEURL3Q96EH8 262 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 NSL1Q96IY1 281 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 ZNF184Q99676 751 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 COQ7Q99807 217 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TM2D3Q9BRN9 247 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 CENPKQ9BS16 269 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 EGLN1Q9GZT9 426 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 RAB9BQ9NP90 201 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 BFARQ9NZS9 450 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 IL20RAQ9UHF4 553 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 TMCO1Q9UM00 188 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 SNX6Q9UNH7 406 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 NPTNQ9Y639 398 aa3.03□□□□□ -1.92
VPS13B-208ENST00000521037 DMBT1Q9UGM3 2413 aaPredicted RBP3.03□□□□□ -1.92
VPS13B-208ENST00000521037 IGHV1-69DA0A0B4J2H0 117 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TEX13DA0A0J9YY54 714 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 E7ESA3 106 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 E9PQ18 207 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 RPL36A-HNRNPH2H7BZ11 118 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 OR7A17O14581 309 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 BIRC5O15392 142 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CLN5O75503 358 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 KCNK2O95069 426 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 PMS2P2O95744 297 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 TOMM40O96008 361 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 IGHV1-69P01742 117 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CD55P08174 381 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 FAM106CPP0CH98 169 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 T-ENOLP0DO92 83 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 ME2P23368 584 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 CRABP2P29373 138 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 PRDX6P30041 224 aa3.02□□□□□ -1.93
VPS13B-208ENST00000521037 C21orf33P30042 268 aaPredicted RBP3.02□□□□□ -1.93
VPS13B-208ENST00000521037 SERPINB1P30740 379 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms