RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ABHD6Q9BV23 337 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 PAPOLGQ9BWT3 736 aaKnown RBP12.53□□□□□ -0.4
CSMD1-207ENST00000520451 RNPEPL1Q9HAU8 725 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 CMC2Q9NRP2 79 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 DUX4Q9UBX2 424 aa12.53□□□□□ -0.4
CSMD1-207ENST00000520451 RPUSD1Q9UJJ7 312 aaKnown RBP12.53□□□□□ -0.4
CSMD1-207ENST00000520451 CMYA5Q8N3K9 4069 aa12.52□□□□□ -0.4
CSMD1-207ENST00000520451 A0A0U1RQK1 487 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 hCG_38984A0A1B0GV85 526 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 TIPRLO75663 272 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 IGHV4-59P01825 116 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 APOC1P02654 83 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 MUC1P15941 1255 aaPredicted RBP12.52□□□□□ -0.41
CSMD1-207ENST00000520451 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
CSMD1-207ENST00000520451 GSTT1P30711 240 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 GSK3AP49840 483 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 GYS2P54840 703 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 DEFA6Q01524 100 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 FAM98BQ52LJ0 330 aaKnown RBP12.52□□□□□ -0.41
CSMD1-207ENST00000520451 WDR38Q5JTN6 314 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 LCN8Q6JVE9 175 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 BRICD5Q6PL45 260 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 WDR82Q6UXN9 313 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 PRSS45Q7RTY3 260 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 PIGWQ7Z7B1 504 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 DHFR2Q86XF0 187 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 IQCF1Q8N6M8 205 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 OR10G2Q8NGC3 310 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 TEX47Q8TBZ9 253 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 OR10A2Q9H208 303 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 MUC13Q9H3R2 512 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 PPP1R3EQ9H7J1 279 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 CNTD2Q9H8S5 307 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 BRD7Q9NPI1 651 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
CSMD1-207ENST00000520451 ONECUT1Q9UBC0 465 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 RHBDD3Q9Y3P4 386 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 KPTNQ9Y664 436 aa12.52□□□□□ -0.41
CSMD1-207ENST00000520451 CLPSL1A2RUU4 121 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 B2RBV5 119 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 GPR137BO60478 399 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 OPRL1P41146 370 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 NAA10P41227 235 aaPredicted RBP12.51□□□□□ -0.41
CSMD1-207ENST00000520451 RPL15P61313 204 aaKnown RBP12.51□□□□□ -0.41
CSMD1-207ENST00000520451 CDONQ4KMG0 1287 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 KLHL12Q53G59 568 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 SHFQ7M4L6 423 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 SLC36A1Q7Z2H8 476 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 VMO1Q7Z5L0 202 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 CSNK2A3Q8NEV1 391 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 DYRK2Q92630 601 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 SEH1LQ96EE3 360 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 PGAM5Q96HS1 289 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 AMELYQ99218 206 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 ZNF319Q9P2F9 582 aa12.51□□□□□ -0.41
CSMD1-207ENST00000520451 A0A1B0GVI7 797 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 ANXA2P2A6NMY6 339 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 H3BN98 237 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-207ENST00000520451 ACOT8O14734 319 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 CDIPTO14735 213 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 GLCEO94923 617 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 H2BFMP0C1H6 154 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 PAICSP22234 425 aaKnown RBP12.5□□□□□ -0.41
CSMD1-207ENST00000520451 IER3P46695 156 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 GMFBP60983 142 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 IL5RAQ01344 420 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 IKZF1Q13422 519 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 MIDNQ504T8 468 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
CSMD1-207ENST00000520451 CD300LDQ6UXZ3 194 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 LDLRAD3Q86YD5 345 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 TIGD4Q8IY51 512 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 ARHGAP24Q8N264 748 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 FTMTQ8N4E7 242 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 PIP4P2Q8N4L2 257 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 LY6G5BQ8NDX9 201 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 C12orf43Q96C57 262 aaKnown RBP12.5□□□□□ -0.41
CSMD1-207ENST00000520451 CCT8L2Q96SF2 557 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 CITED1Q99966 193 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 MICU1Q9BPX6 476 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 OR51V1Q9H2C8 321 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 RGCCQ9H4X1 137 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 DNAJB11Q9UBS4 358 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
CSMD1-207ENST00000520451 FAM96BQ9Y3D0 163 aa12.5□□□□□ -0.41
CSMD1-207ENST00000520451 NDUFB3O43676 98 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 MS4A2Q01362 244 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 TRIM25Q14258 630 aaKnown RBP12.49□□□□□ -0.41
CSMD1-207ENST00000520451 SNCBQ16143 134 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 STUMQ69YW2 141 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 RHOUQ7L0Q8 258 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.49□□□□□ -0.41
CSMD1-207ENST00000520451 CMTM4Q8IZR5 234 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 GALNT4Q8N4A0 578 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 OR5T2Q8NGG2 359 aa12.49□□□□□ -0.41
CSMD1-207ENST00000520451 GIPC3Q8TF64 312 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms