RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NIPSNAP2O75323 286 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SC5DO75845 299 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 AQP8O94778 261 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OTCP00480 354 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CST1P01037 141 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL10P02778 98 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RLN2P04090 185 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CRYBA1P05813 215 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ASGR1P07306 291 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ANXA3P12429 323 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RNH1P13489 461 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GABRA1P14867 456 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ADCYAP1P18509 176 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSPAN8P19075 237 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NPR2P20594 1047 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 UQCRC2P22695 453 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ACP1P24666 158 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RORAP35398 523 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MAS1LP35410 378 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SAA4P35542 130 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SOX6P35712 828 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTGFRP43088 359 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 BDKRB1P46663 353 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 HTR5AP47898 357 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RFX3P48380 749 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 KCNJ3P48549 501 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRMT2P55345 433 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLDN8P56748 225 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ERVPABLB-1P60509 514 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MAXP61244 160 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SNRPGP62308 76 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CSTF1Q05048 431 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LRRC74AQ0VAA2 488 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ST3GAL4Q11206 333 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TPBGQ13641 420 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF235Q14590 738 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRAM2Q15035 370 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSNQ15631 228 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GGTA1PQ4G0N0 100 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC22A6Q4U2R8 563 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP6AP1LQ52LC2 224 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLLU1OSQ5K130 101 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CTSL3PQ5NE16 218 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM74A1Q5RGS3 127 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPRC6AQ5T6X5 926 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MFSD14CQ5VZR4 134 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TPGS2Q68CL5 300 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF660Q6AZW8 331 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR5M10Q6IEU7 315 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC8B1Q6J4K2 584 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CNIH2Q6PI25 160 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SBSNQ6UWP8 590 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL17Q6UXB2 119 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 WASH2PQ6VEQ5 465 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 DPY19L2P2Q6ZN68 376 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RABEPKQ7Z6M1 372 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ADGRD2Q7Z7M1 963 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LHFPL3Q86UP9 236 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MISPQ8IVT2 679 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SKA3Q8IX90 412 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIANPQ8IYJ0 282 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PUSL1Q8N0Z8 303 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ARRDC1Q8N5I2 433 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 C12orf45Q8N5I9 185 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPICQ8N5J4 248 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LRRC17Q8N6Y2 441 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TTC29Q8NA56 475 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM71CQ8NEG0 241 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP6V1C2Q8NEY4 427 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR4K2Q8NGD2 314 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR13C4Q8NGS5 318 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR6X1Q8NH79 312 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF461Q8TAF7 563 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NANPQ8TBE9 248 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD200R1Q8TD46 325 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 EEF1AKMT1Q8WVE0 214 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIH1D2Q8WWB5 315 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FBXO32Q969P5 355 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CPNE4Q96A23 557 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM45BQ96B21 275 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TUBGCP3Q96CW5 907 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PYURFQ96I23 114 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FCRL1Q96LA6 429 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 C9orf85Q96MD7 179 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MS4A4EQ96PG1 132 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LYSMD1Q96S90 227 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPR21Q99679 349 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 KCNS3Q9BQ31 491 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF649Q9BS31 505 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GSDMCQ9BYG8 508 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR51J1Q9H342 316 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RIBC2Q9H4K1 309 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ELOVL6Q9H5J4 265 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLMPQ9H6B4 373 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NANSQ9NR45 359 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CENPMQ9NSP4 180 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 STARD5Q9NSY2 213 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 COPZ2Q9P299 210 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LHX3Q9UBR4 397 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms