RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NIPSNAP2O75323 286 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SC5DO75845 299 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 AQP8O94778 261 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OTCP00480 354 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CST1P01037 141 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL10P02778 98 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RLN2P04090 185 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CRYBA1P05813 215 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ASGR1P07306 291 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ANXA3P12429 323 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RNH1P13489 461 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GABRA1P14867 456 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ADCYAP1P18509 176 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSPAN8P19075 237 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NPR2P20594 1047 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 UQCRC2P22695 453 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ACP1P24666 158 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RORAP35398 523 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MAS1LP35410 378 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SAA4P35542 130 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SOX6P35712 828 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTGFRP43088 359 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 BDKRB1P46663 353 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 HTR5AP47898 357 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RFX3P48380 749 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 KCNJ3P48549 501 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRMT2P55345 433 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLDN8P56748 225 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ERVPABLB-1P60509 514 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MAXP61244 160 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SNRPGP62308 76 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CSTF1Q05048 431 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LRRC74AQ0VAA2 488 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ST3GAL4Q11206 333 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TPBGQ13641 420 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF235Q14590 738 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TRAM2Q15035 370 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TSNQ15631 228 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GSG1Q2KHT4 349 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GGTA1PQ4G0N0 100 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC22A6Q4U2R8 563 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP6AP1LQ52LC2 224 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLLU1OSQ5K130 101 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CTSL3PQ5NE16 218 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM74A1Q5RGS3 127 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPRC6AQ5T6X5 926 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MFSD14CQ5VZR4 134 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TPGS2Q68CL5 300 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF660Q6AZW8 331 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR5M10Q6IEU7 315 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC8B1Q6J4K2 584 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CNIH2Q6PI25 160 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SBSNQ6UWP8 590 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CXCL17Q6UXB2 119 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 WASH2PQ6VEQ5 465 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 DPY19L2P2Q6ZN68 376 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RABEPKQ7Z6M1 372 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ADGRD2Q7Z7M1 963 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LHFPL3Q86UP9 236 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MISPQ8IVT2 679 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SKA3Q8IX90 412 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIANPQ8IYJ0 282 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PUSL1Q8N0Z8 303 aaKnown RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ARRDC1Q8N5I2 433 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 C12orf45Q8N5I9 185 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPICQ8N5J4 248 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LRRC17Q8N6Y2 441 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TTC29Q8NA56 475 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FAM71CQ8NEG0 241 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP6V1C2Q8NEY4 427 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR4K2Q8NGD2 314 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR13C4Q8NGS5 318 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR6X1Q8NH79 312 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF461Q8TAF7 563 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NANPQ8TBE9 248 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD200R1Q8TD46 325 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 EEF1AKMT1Q8WVE0 214 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIH1D2Q8WWB5 315 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FBXO32Q969P5 355 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CPNE4Q96A23 557 aaPredicted RBP2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM45BQ96B21 275 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 TUBGCP3Q96CW5 907 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 PYURFQ96I23 114 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 FCRL1Q96LA6 429 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 C9orf85Q96MD7 179 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 MS4A4EQ96PG1 132 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LYSMD1Q96S90 227 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPR21Q99679 349 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 KCNS3Q9BQ31 491 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF649Q9BS31 505 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 GSDMCQ9BYG8 508 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR51J1Q9H342 316 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 RIBC2Q9H4K1 309 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 ELOVL6Q9H5J4 265 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLMPQ9H6B4 373 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 NANSQ9NR45 359 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 CENPMQ9NSP4 180 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 STARD5Q9NSY2 213 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 COPZ2Q9P299 210 aa2.48□□□□□ -2.01
HMGB1P41-201ENST00000520234 LHX3Q9UBR4 397 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms