RNA–Protein interactions for RNA: ENST00000519120.1

MRPS28-204, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 403 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-204ENST00000519120 YY1AP1Q9H869 796 aa13.08□□□□□ -0.32
MRPS28-204ENST00000519120 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
MRPS28-204ENST00000519120 PDP1Q9P0J1 537 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-204ENST00000519120 PCDHGB1Q9Y5G3 927 aa13.08□□□□□ -0.32
MRPS28-204ENST00000519120 MPC1Q9Y5U8 109 aa13.08□□□□□ -0.32
MRPS28-204ENST00000519120 ANXA2P2A6NMY6 339 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 SRRM5B3KS81 715 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 GNGT2O14610 69 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 DVL1O14640 695 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 GPR37O15354 613 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 TOX4O94842 621 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 GYPAP02724 150 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 ANXA8P13928 327 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 GNALP38405 381 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 MICBQ29980 383 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 DEFB112Q30KQ8 113 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 DNAL1Q4LDG9 190 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 METTL11BQ5VVY1 283 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 WDR82Q6UXN9 313 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 BRD3OSQ6XYD6 125 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 TMEM179BQ7Z7N9 219 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-204ENST00000519120 DNAJC9Q8WXX5 260 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 OTULINQ96BN8 352 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 ITPKCQ96DU7 683 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 PGAM5Q96HS1 289 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 FAM71F1Q96KD3 344 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-204ENST00000519120 TBX15Q96SF7 602 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 MICU1Q9BPX6 476 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 PCGF1Q9BSM1 259 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 SIRPDQ9H106 197 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 SLITRK2Q9H156 845 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 ZNF696Q9H7X3 374 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 ZNF319Q9P2F9 582 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 MMP24Q9Y5R2 645 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 DOCK11Q5JSL3 2073 aa13.07□□□□□ -0.32
MRPS28-204ENST00000519120 TMEM210A6NLX4 147 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 HOXA3O43365 443 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 E2F6O75461 281 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 CST4P01036 141 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 SFTPBP07988 381 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 POU1F1P28069 291 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 PSMA6P60900 246 aaKnown RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 Q6YL49 198 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 KRT74Q7RTS7 529 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 SLC36A1Q7Z2H8 476 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 PAPD5Q8NDF8 572 aaKnown RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 OR10Z1Q8NGY1 313 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 LRRC29Q8WV35 223 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 GATAD2BQ8WXI9 593 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 ZDHHC16Q969W1 377 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 RTL8AQ9BWD3 113 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 PAPOLGQ9BWT3 736 aaKnown RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 TEX12Q9BXU0 123 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 DNTTIP1Q9H147 329 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 SLC25A19Q9HC21 320 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 DNAJC27Q9NZQ0 273 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 RPUSD1Q9UJJ7 312 aaKnown RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 RHBDD3Q9Y3P4 386 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 SOX21Q9Y651 276 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-204ENST00000519120 KPTNQ9Y664 436 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 POMT1Q9Y6A1 747 aa13.06□□□□□ -0.32
MRPS28-204ENST00000519120 CENPVL3A0A0U1RRI6 287 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 A0A1B0GUS0 222 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 ACOD1A6NK06 481 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 FCN3O75636 299 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 RPL15P61313 204 aaKnown RBP13.05□□□□□ -0.32
MRPS28-204ENST00000519120 FLOT2Q14254 428 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 FAM76BQ5HYJ3 339 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 ATPAF1Q5TC12 328 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-204ENST00000519120 DEGS2Q6QHC5 323 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 BTN2A1Q7KYR7 527 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 CPOQ8IVL8 374 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 LY6G5BQ8NDX9 201 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 NRBF2Q96F24 287 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
MRPS28-204ENST00000519120 ACOXLQ9NUZ1 547 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 DNAJB9Q9UBS3 223 aa13.05□□□□□ -0.32
MRPS28-204ENST00000519120 IGHV1-69DA0A0B4J2H0 117 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 TCRBV3S1A0A5B6 114 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 SELENOFO60613 162 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 IGHV1-69P01742 117 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 ALOX5APP20292 161 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 SLC2A5P22732 501 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 DCTDP32321 178 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 CSNK2BP67870 215 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 GFOD2Q3B7J2 385 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 CDONQ4KMG0 1287 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 WDR38Q5JTN6 314 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 TRPM8Q7Z2W7 1104 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 OR5P3Q8WZ94 311 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 TMIGD2Q96BF3 282 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 YIPF3Q9GZM5 350 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 RASSF4Q9H2L5 321 aa13.04□□□□□ -0.32
MRPS28-204ENST00000519120 CNTD2Q9H8S5 307 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms