RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 PSTKQ8IV42 348 aaKnown RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 C17orf47Q8NEP4 570 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR9A1PQ8NGU1 263 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 NEIL3Q8TAT5 605 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 RAPGEF5Q92565 580 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 UFD1Q92890 307 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 FGGYQ96C11 551 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNAJC19Q96DA6 116 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PLEKHA8Q96JA3 519 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 C8orf76Q96K31 380 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 JSRP1Q96MG2 331 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZFP3Q96NJ6 502 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 SMIM14Q96QK8 99 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 MCCC1Q96RQ3 725 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CYTH2Q99418 400 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 RNF2Q99496 336 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 CNPY3Q9BT09 278 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRIM15Q9C019 465 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 BPESC1Q9GZL8 116 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 MFFQ9GZY8 342 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 BLZF1Q9H2G9 400 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PPA2Q9H2U2 334 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 RBKSQ9H477 322 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 PAK1IP1Q9NWT1 392 aaPredicted RBP3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF581Q9P0T4 197 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNAH3Q8TD57 4116 aa3.6□□□□□ -1.83
HMGB1P23-201ENST00000518743 SRRM2Q9UQ35 2752 aaKnown RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2AG2A6NM03 316 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 B4DSR2 109 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 LSM1O15116 133 aaKnown RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 PSTPIP1O43586 416 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGHV3-13P01766 116 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SERPIND1P05546 499 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 PAEPP09466 180 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 RBMY1A1P0DJD3 496 aaKnown RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 VHLP40337 213 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 MAGEA1P43355 309 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR4D2P58180 307 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SNRPFP62306 86 aaKnown RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 CD300CQ08708 224 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 CUL1Q13616 776 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OXA1LQ15070 435 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 TGFBIQ15582 683 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 DGUOKQ16854 277 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 LEMD1Q68G75 181 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 UGT2A3Q6UWM9 527 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 NT5DC3Q86UY8 548 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC25A42Q86VD7 318 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2L13Q8N349 312 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 Q8N377 158 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2L3Q8NG85 312 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR6T1Q8NGN1 323 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 DNAJA4Q8WW22 397 aaPredicted RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 ELMO1Q92556 727 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 C20orf24Q9BUV8 137 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SRXN1Q9BYN0 137 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SELENOIQ9C0D9 397 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 NMUR2Q9GZQ4 415 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 CHRNA10Q9GZZ6 450 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 QPCTLQ9NXS2 382 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 CLEC5AQ9NY25 188 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR1A1Q9P1Q5 309 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC7A8Q9UHI5 535 aa3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRAV9-2A0A087WT02 112 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR5B21A6NL26 309 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 E9PQ18 207 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 TRAPPC6AO75865 159 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 RCBTB2O95199 551 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 H6PDO95479 791 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FGFR1OPO95684 399 aaKnown RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OXSR1O95747 527 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 P04436 131 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 CNR1P21554 472 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 KITLGP21583 273 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 CMA1P23946 247 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 MT3P25713 68 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 GDF1P27539 372 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FOXN2P32314 431 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FDFT1P37268 417 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 RFX3P48380 749 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 SPINT3P49223 89 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 SH3BGRP55822 239 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 ENPEPQ07075 957 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 MAB21L1Q13394 359 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR5I1Q13606 314 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 NSDHLQ15738 373 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 DUSP7Q16829 419 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 HIGD2BQ4VC39 106 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 PAGE2BQ5JRK9 111 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 SLC22A10Q63ZE4 541 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 OR52E8Q6IFG1 317 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 UFSP1Q6NVU6 142 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FAM183BPQ6ZVS7 135 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 ZNF440Q8IYI8 595 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 MICU2Q8IYU8 434 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 GTPBP8Q8N3Z3 284 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 CCDC71LQ8N9Z2 235 aa3.58□□□□□ -1.84
HMGB1P23-201ENST00000518743 FNDC5Q8NAU1 212 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms