RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 C18orf15Q96N68 181 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 CDX2Q99626 313 aaPredicted RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 SFXN3Q9BWM7 321 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 PEF1Q9UBV8 284 aaKnown RBP2.35□□□□□ -2.03
SQLE-202ENST00000518604 PSME2Q9UL46 239 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 COMMD3-BMI1R4GMX3 469 aa2.35□□□□□ -2.03
SQLE-202ENST00000518604 A0A0A6YYD5 115 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 ZNF98A6NK75 572 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 POLR1CO15160 346 aaPredicted RBP2.34□□□□□ -2.03
SQLE-202ENST00000518604 PSPHP1O15172 72 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 MPDU1O75352 247 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 TGM6O95932 706 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 LHBP01229 141 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 TRBV12-3P01733 135 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 MPV17P39210 176 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 CLDN6P56747 220 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 TPRG1LQ5T0D9 272 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 PIP5KL1Q5T9C9 394 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 RAB43Q86YS6 212 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 CMTM8Q8IZV2 173 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 DRAM1Q8N682 238 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 ZNF645Q8N7E2 425 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 AGR3Q8TD06 166 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 CDS1Q92903 461 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 PEX13Q92968 403 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 RDH12Q96NR8 316 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 C1orf50Q9BV19 199 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 NUDT9Q9BW91 350 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 REEP1Q9H902 201 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 CSNK1G1Q9HCP0 422 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 DDX19BQ9UMR2 479 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 LRRC42Q9Y546 428 aa2.34□□□□□ -2.03
SQLE-202ENST00000518604 MROH7Q68CQ1 1323 aa2.34□□□□□ -2.04
SQLE-202ENST00000518604 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.34□□□□□ -2.04
SQLE-202ENST00000518604 NCF1BA6NI72 391 aaPredicted RBP2.33□□□□□ -2.04
SQLE-202ENST00000518604 SLC22A20A6NK97 555 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 NCF1CA8MVU1 366 aaPredicted RBP2.33□□□□□ -2.04
SQLE-202ENST00000518604 UPK1BO75841 260 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 RPN2P04844 631 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR1G1P47890 313 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 RPL18AQ02543 176 aaKnown RBP2.33□□□□□ -2.04
SQLE-202ENST00000518604 DMC1Q14565 340 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 MAD2L1BPQ15013 274 aaPredicted RBP2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR1Q1Q15612 314 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 GABRA6Q16445 453 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR2T5Q6IEZ7 315 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 PRSS54Q6PEW0 395 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 CASP12Q6UXS9 341 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 Q6ZSR6 202 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 KIF2BQ8N4N8 673 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR10Z1Q8NGY1 313 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR2T29Q8NH02 315 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 OR1S1Q8NH92 325 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 SCGB3A2Q96PL1 93 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 C8orf33Q9H7E9 229 aaPredicted RBP2.33□□□□□ -2.04
SQLE-202ENST00000518604 PHLPP2Q6ZVD8 1323 aa2.33□□□□□ -2.04
SQLE-202ENST00000518604 LINC01619G3V211 115 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 H3BN98 237 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 K7EM74 188 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 M0R1X1 148 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 MYL12BO14950 172 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 SIVA1O15304 175 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 AKR7A2O43488 359 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 CATP04040 527 aaKnown RBP2.32□□□□□ -2.04
SQLE-202ENST00000518604 NTF3P20783 257 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 NDUFAF7Q7L592 441 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 MRPL21Q7Z2W9 205 aaKnown RBP2.32□□□□□ -2.04
SQLE-202ENST00000518604 DAW1Q8N136 415 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 ISOC2Q96AB3 205 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 ISG20Q96AZ6 181 aaKnown RBP2.32□□□□□ -2.04
SQLE-202ENST00000518604 MRPL48Q96GC5 212 aaKnown RBP2.32□□□□□ -2.04
SQLE-202ENST00000518604 SMARCD1Q96GM5 515 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 SNF8Q96H20 258 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 FAM19A4Q96LR4 140 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 BLZF1Q9H2G9 400 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 PLEKHF2Q9H8W4 249 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 CHRAC1Q9NRG0 131 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 IL37Q9NZH6 218 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 TTC41PQ6P2S7 1318 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 JCADQ9P266 1359 aa2.32□□□□□ -2.04
SQLE-202ENST00000518604 SCN1AP35498 2009 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 A0A0B4J2E0 115 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 A8MWL6 223 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 ZNF99A8MXY4 864 aaPredicted RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 HACD1B0YJ81 288 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 TRDMT1O14717 391 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 OR7C2O60412 319 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 LCA5LO95447 670 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 IGLV2-8P01709 118 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 THRAP10827 490 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 NELFEP18615 380 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 MSR1P21757 451 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 PRKACBP22694 351 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 CXCR1P25024 350 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 CCT6AP40227 531 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 IDH2P48735 452 aaKnown RBP2.31□□□□□ -2.04
SQLE-202ENST00000518604 DAOAP59103 153 aa2.31□□□□□ -2.04
SQLE-202ENST00000518604 TAS2R43P59537 309 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms