RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 C6orf52Q5T4I8 152 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 PRAMEF6Q5VXH4 476 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 KRT74Q7RTS7 529 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 CATSPERDQ86XM0 798 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 C8orf59Q8N0T1 100 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-217ENST00000518538 SEMA6DQ8NFY4 1073 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 OR52I1Q8NGK6 324 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 Q8TCH9 128 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 C1orf159Q96HA4 380 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 FAM71F1Q96KD3 344 aaPredicted RBP18.53■□□□□ 0.56
VEGFA-217ENST00000518538 ABCB9Q9NP78 766 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 SLC22A13Q9Y226 551 aa18.53■□□□□ 0.56
VEGFA-217ENST00000518538 LOC100289279A0A1B0GTE1 492 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 ISPDA4D126 451 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 H0YJX3 145 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 DHRS3O75911 302 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 IGHV2-70P01814 119 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 GNAO1P09471 354 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 ZNF16P17020 682 aaPredicted RBP18.52■□□□□ 0.56
VEGFA-217ENST00000518538 PMELP40967 661 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 GALEQ14376 348 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 MPPED2Q15777 294 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 TFAP2CQ92754 450 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 MSI2Q96DH6 328 aaKnown RBP18.52■□□□□ 0.56
VEGFA-217ENST00000518538 FN3KRPQ9HA64 309 aa18.52■□□□□ 0.56
VEGFA-217ENST00000518538 YLPM1P49750 1951 aaKnown RBP18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF816-ZNF321PA0A0X1KG74 233 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ANXA2P2A6NMY6 339 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 CYB5R3P00387 301 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-217ENST00000518538 OR12D2P58182 307 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 LMO4P61968 165 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 BTG1P62324 171 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 RIPPLY1Q0D2K3 151 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 PRDX4Q13162 271 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ZBTB37Q5TC79 503 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 EGFL6Q8IUX8 553 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 C1orf87Q8N0U7 546 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 OR11L1Q8NGX0 322 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 PIGCQ92535 297 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 RNF166Q96A37 237 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ITPKCQ96DU7 683 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 C4orf36Q96KX1 117 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 GAL3ST1Q99999 423 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ALG8Q9BVK2 526 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 JAM3Q9BX67 310 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 VCX3BQ9H321 246 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 PPP1R3EQ9H7J1 279 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 FGF20Q9NP95 211 aaPredicted RBP18.51■□□□□ 0.55
VEGFA-217ENST00000518538 YAE1D1Q9NRH1 226 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 UFSP2Q9NUQ7 469 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 ERVK13-1Q9NX77 482 aa18.51■□□□□ 0.55
VEGFA-217ENST00000518538 A0A1B0GTI1 187 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF850A8MQ14 1090 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 P2RY10O00398 339 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 GRPP07492 148 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 IRF2P14316 349 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 CCL1P22362 96 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 PSMB10P40306 273 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 AQP4P55087 323 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 CDH15P55291 814 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 RIPK1Q13546 671 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 TMEM155Q4W5P6 130 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 WDR38Q5JTN6 314 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 Q6ZSR3 168 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF771Q7L3S4 317 aaPredicted RBP18.5■□□□□ 0.55
VEGFA-217ENST00000518538 DOK3Q7L591 496 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 THAP5Q7Z6K1 395 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 LHFPL3Q86UP9 236 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 SYS1Q8N2H4 156 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 PRSS35Q8N3Z0 413 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 LINC01356Q8N9X3 169 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 RAB39BQ96DA2 213 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 MICU1Q9BPX6 476 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF649Q9BS31 505 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF665Q9H7R5 613 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 V9GYS6 101 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 ZANQ9Y493 2812 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 CSPG4Q6UVK1 2322 aa18.5■□□□□ 0.55
VEGFA-217ENST00000518538 IRGMA1A4Y4 181 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 J3QLW9 94 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 FSTL3O95633 263 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 IGHV2-5P01817 119 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 ZNF19P17023 458 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 MDH2P40926 338 aaKnown RBP18.49■□□□□ 0.55
VEGFA-217ENST00000518538 ZMYND11Q15326 602 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 FDX2Q6P4F2 183 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 WDR86Q86TI4 376 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 LRRC28Q86X40 367 aaPredicted RBP18.49■□□□□ 0.55
VEGFA-217ENST00000518538 ZDHHC23Q8IYP9 409 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 OR2G2Q8NGZ5 317 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 FBLIM1Q8WUP2 373 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 OR5P3Q8WZ94 311 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 PELI1Q96FA3 418 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 RTL8AQ9BWD3 113 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 ENPP5Q9UJA9 477 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 PIGLQ9Y2B2 252 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 ABCA1O95477 2261 aa18.49■□□□□ 0.55
VEGFA-217ENST00000518538 A6NLC8 198 aa18.48■□□□□ 0.55
VEGFA-217ENST00000518538 DHRS7CA6NNS2 312 aa18.48■□□□□ 0.55
VEGFA-217ENST00000518538 A8MV72 311 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms