RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 C1orf53Q5VUE5 145 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 ARMC6Q6NXE6 501 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 HEPN1Q6WQI6 88 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
PCM1-204ENST00000517730 TMEM59Q9BXS4 323 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 PBOV1Q9GZY1 135 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 SMDT1Q9H4I9 107 aa13.48□□□□□ -0.25
PCM1-204ENST00000517730 ALPK2Q86TB3 2170 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 TMED7-TICAM2A0A0A6YYA0 188 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 A0A1B0GW64 132 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 H0Y8X5 98 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 GMFGO60234 142 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 NME2P1O60361 137 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 AHSA1O95433 338 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 IFNA21P01568 189 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 SLC37A1P57057 533 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 PPP1CAP62136 330 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 FOXK1P85037 733 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 KIAA0141Q14154 515 aaPredicted RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 FAM219AQ8IW50 185 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 LFNGQ8NES3 379 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 PATE1Q8WXA2 126 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 URM1Q9BTM9 101 aaKnown RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 PTPRSQ13332 1948 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 SPEGQ15772 3267 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 A0A1W2PPE2 198 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 A0A1W2PQD3 144 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 ZNF354AO60765 605 aaPredicted RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 NME1P15531 152 aaKnown RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 ZNF84P51523 738 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 TMEM50BP56557 158 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 C19orf47Q8N9M1 422 aaKnown RBP13.47□□□□□ -0.25
PCM1-204ENST00000517730 TMEM104Q8NE00 496 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 CD300LFQ8TDQ1 290 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 BMFQ96LC9 184 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 YPEL4Q96NS1 127 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 CFHR5Q9BXR6 569 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 NRSN2Q9GZP1 204 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCM1-204ENST00000517730 C19orf12Q9NSK7 152 aa13.47□□□□□ -0.25
PCM1-204ENST00000517730 RAD51DO75771 328 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 OR2C1O95371 312 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 RD3LP0DJH9 198 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 CHATP28329 748 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 GPX4P36969 197 aaPredicted RBP13.46□□□□□ -0.25
PCM1-204ENST00000517730 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
PCM1-204ENST00000517730 SLC35A1P78382 337 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 TDGQ13569 410 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 CLINT1Q14677 625 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 C9orf152Q5JTZ5 239 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 CSNK2A3Q8NEV1 391 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 C1orf147Q96MC9 270 aaPredicted RBP13.46□□□□□ -0.25
PCM1-204ENST00000517730 WDR77Q9BQA1 342 aaPredicted RBP13.46□□□□□ -0.25
PCM1-204ENST00000517730 GINS3Q9BRX5 216 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 SMIM3Q9BZL3 60 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 RTN4RQ9BZR6 473 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 UFSP2Q9NUQ7 469 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 EHFQ9NZC4 300 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 HDGFL3Q9Y3E1 203 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 CPAMD8Q8IZJ3 1885 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 MYO15AQ9UKN7 3530 aa13.46□□□□□ -0.25
PCM1-204ENST00000517730 DAP3P51398 398 aaKnown RBP13.46□□□□□ -0.26
PCM1-204ENST00000517730 COL13A1Q5TAT6 717 aaPredicted RBP13.46□□□□□ -0.26
PCM1-204ENST00000517730 SLAMF6Q96DU3 332 aa13.46□□□□□ -0.26
PCM1-204ENST00000517730 ARHGAP5-AS1Q96IT6 56 aa13.46□□□□□ -0.26
PCM1-204ENST00000517730 CHST5Q9GZS9 411 aa13.46□□□□□ -0.26
PCM1-204ENST00000517730 PARPBPQ9NWS1 579 aa13.46□□□□□ -0.26
PCM1-204ENST00000517730 GAR1Q9NY12 217 aaKnown RBP13.46□□□□□ -0.26
PCM1-204ENST00000517730 KIR2DS5A0A0G2JLQ3 304 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 A0A0G2JNG1 304 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 E5RGE8 158 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 KIR2DS3K7RE56 304 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 SOX1O00570 391 aaPredicted RBP13.45□□□□□ -0.26
PCM1-204ENST00000517730 IL12BP29460 328 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 PTGER4P35408 488 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 SNU13P55769 128 aaKnown RBP13.45□□□□□ -0.26
PCM1-204ENST00000517730 RPS23P62266 143 aaKnown RBP13.45□□□□□ -0.26
PCM1-204ENST00000517730 KIR2DS5Q14953 304 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 PYY3Q5JQD4 70 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 C12orf76Q8N812 135 aaPredicted RBP13.45□□□□□ -0.26
PCM1-204ENST00000517730 ASB10Q8WXI3 467 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 GNRHR2Q96P88 292 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 ST6GALNAC5Q9BVH7 336 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 PARP12Q9H0J9 701 aaKnown RBP13.45□□□□□ -0.26
PCM1-204ENST00000517730 MOB1AQ9H8S9 216 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 NSG2Q9Y328 171 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 ALG1L2C9J202 215 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 NPIPA5E9PKD4 350 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 BCKDHBP21953 392 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 FCARP24071 287 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 LMO1P25800 156 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 ITGA3P26006 1051 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 P2RY1P47900 373 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 DNLZQ5SXM8 178 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 TANGO2Q6ICL3 276 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 GRINAQ7Z429 371 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 PPP1R3BQ86XI6 285 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 SGPP2Q8IWX5 399 aa13.45□□□□□ -0.26
PCM1-204ENST00000517730 AVL9Q8NBF6 648 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms