RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CRMP1Q14194 572 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MELKQ14680 651 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 GINS1Q14691 196 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PCBP2Q15366 365 aaKnown RBP eCLIP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 BATFQ16520 125 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PLPPR5Q32ZL2 321 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MPPE1Q53F39 396 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PDZD11Q5EBL8 140 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF789Q5FWF6 425 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TCEAL5Q5H9L2 206 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 CRB2Q5IJ48 1285 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SPANXN4Q5MJ08 99 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ATXN7L2Q5T6C5 722 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRIM40Q6P9F5 258 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRSS54Q6PEW0 395 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TEX38Q6PEX7 206 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF322Q6U7Q0 402 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM205Q6UW68 189 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TOMM20LQ6UXN7 152 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 UNQ9370/PRO34162Q6UXP9 181 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 UNQ6126/PRO20091Q6UXV3 157 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TEX43Q6ZNM6 134 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 Q6ZPB1 254 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 CEACAM19Q7Z692 300 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RBM45Q8IUH3 476 aaKnown RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MSRB3Q8IXL7 192 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC39A11Q8N1S5 342 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF615Q8N8J6 731 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZDHHC22Q8N966 263 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RNF149Q8NC42 400 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 NECAP1Q8NC96 275 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF485Q8NCK3 441 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR4D9Q8NGE8 314 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR13C5Q8NGS8 318 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR52I2Q8NH67 350 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 GPR119Q8TDV5 335 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ABHD5Q8WTS1 349 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RNF133Q8WVZ7 376 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RLN3Q8WXF3 142 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 AUTS2Q8WXX7 1259 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 FAM3CQ92520 227 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SUSD6Q92537 303 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 DCUN1D4Q92564 292 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 DYRK2Q92630 601 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 FRZBQ92765 325 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 RAB1CQ92928 201 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 LENG9Q96B70 501 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF707Q96C28 371 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLAMF6Q96DU3 332 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 IMP4Q96G21 291 aaKnown RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 POM121L2Q96KW2 1035 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PRRC1Q96M27 445 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 GUCD1Q96NT3 240 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 IL17FQ96PD4 163 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MS4A10Q96PG2 267 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 HIST1H2AAQ96QV6 131 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR5B12Q96R08 314 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TRIB3Q96RU7 358 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MYOCQ99972 504 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TPPP3Q9BW30 176 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SLC5A7Q9GZV3 580 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 KATNBL1Q9H079 304 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 OR52D1Q9H346 318 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZDHHC6Q9H6R6 413 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 CXorf36Q9H7Y0 433 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ELL3Q9HB65 397 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 CDH20Q9HBT6 801 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TXNRD2Q9NNW7 524 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 SEMA4BQ9NPR2 832 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TMEM9BQ9NQ34 198 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TUBG2Q9NRH3 451 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MRPL17Q9NRX2 175 aaKnown RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ZNF586Q9NXT0 402 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ELOVL5Q9NYP7 299 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TVP23BQ9NYZ1 205 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 NUDT4Q9NZJ9 180 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 WNT16Q9UBV4 365 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MTFP1Q9UDX5 166 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 PCTPQ9UKL6 214 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 NTNG1Q9Y2I2 539 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 NOP16Q9Y3C1 178 aaKnown RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 TBL2Q9Y4P3 447 aaKnown RBP4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 YIPF1Q9Y548 306 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 NRAPQ86VF7 1730 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 ALS2Q96Q42 1657 aa4.28□□□□□ -1.72
HMGB1P19-201ENST00000517578 MIA3Q5JRA6 1907 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRAV8-7A0A075B6U6 113 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LOC100509620A0A075B734 347 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LOC105371242A0A075B767 164 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 KCNE1BA0A087WTH5 132 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 IGHV1-69-2A0A0G2JMI3 117 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 A0A1W2PPV4 95 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MAP1LC3B2A6NCE7 125 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR2W5A6NFC9 320 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PGPEP1LA6NFU8 196 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CD8B2A6NJW9 211 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 VSTM2BA6NLU5 285 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 IFITM5A6NNB3 132 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF891A8MT65 544 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 H3BQ15 152 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms