RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 VHLP40337 213 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 BDKRB1P46663 353 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 TUFMP49411 452 aaKnown RBP-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 NUDT2P50583 147 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 CAPZA1P52907 286 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 CTBP2P56545 445 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 NUTF2P61970 127 aaKnown RBP-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 CLINT1Q14677 625 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 PAFAH1B3Q15102 231 aaKnown RBP-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 CHI3L2Q15782 390 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 ARHGAP11BQ3KRB8 267 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM74A3Q4VXF1 159 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR52E8Q6IFG1 317 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 CD164L2Q6UWJ8 174 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 TMEM182Q6ZP80 229 aaPredicted RBP-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 LANCL3Q6ZV70 420 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 SLC36A1Q7Z2H8 476 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR51L1Q8NGJ5 315 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR10G6Q8NH81 332 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 RXFP2Q8WXD0 754 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 PANX3Q96QZ0 392 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 GIN1Q9NXP7 522 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 NKIRAS2Q9NYR9 191 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 MRPL27Q9P0M9 148 aaKnown RBP-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 KLK9Q9UKQ9 250 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 GPR132Q9UNW8 380 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZGRF1Q86YA3 2104 aa-2.56□□□□□ -2.82
SNORA40.16-201ENST00000517238 F5P12259 2224 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 SPTBP11277 2137 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 PTPRSQ13332 1948 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 C2orf70A6NJV1 201 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TRDCB7Z8K6 153 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 SPOPO43791 374 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 BEST1O76090 585 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CRYGBP07316 175 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ERCC1P07992 297 aaPredicted RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CECR9P0C854 216 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ANXA3P12429 323 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CCL4P13236 92 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 FCARP24071 287 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TSPOP30536 169 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TALDO1P37837 337 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 GRK6P43250 576 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CDKN1BP46527 198 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 RAB28P51157 221 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 HSPA2P54652 639 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ACTR3P61158 418 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZNF117Q03924 483 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 HTR4Q13639 388 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TMEM220Q6QAJ8 160 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 PATE2Q6UY27 113 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 LINC00696Q6ZRV3 163 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 FAM19A5Q7Z5A7 132 aaPredicted RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 HEATR4Q86WZ0 1026 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZFP82Q8N141 532 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TTC39CQ8N584 583 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ARFGAP2Q8N6H7 521 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 DRAXINQ8NBI3 349 aaPredicted RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR11G2Q8NGC1 345 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR6Q1Q8NGQ2 317 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 OR8S1Q8NH09 359 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 WDR36Q8NI36 951 aaKnown RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ZCRB1Q8TBF4 217 aaKnown RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 PRPF31Q8WWY3 499 aaKnown RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 AQP3Q92482 292 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CCT6BQ92526 530 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 BSCL2Q96G97 398 aaPredicted RBP-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 Q96MT0 163 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 SLC35A5Q9BS91 424 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TMEM243Q9BU79 118 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TEX12Q9BXU0 123 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 ITPAQ9BY32 194 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CHST6Q9GZX3 395 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 UCK1Q9HA47 277 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 SYTL2Q9HCH5 934 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 PDE7BQ9NP56 450 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 TMEM38BQ9NVV0 291 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 VANGL2Q9ULK5 521 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 COPS3Q9UNS2 423 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 GMEB1Q9Y692 573 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 MGAM2Q2M2H8 2515 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 CAMTA1Q9Y6Y1 1673 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 LAMC3Q9Y6N6 1575 aa-2.57□□□□□ -2.82
SNORA40.16-201ENST00000517238 KIAA0100Q14667 2235 aaKnown RBP-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 TRAV14DV4A0A0A6YYC5 116 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 TCRBV21S2A2A0A5A6 115 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 C2orf74A8MZ97 194 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 SH2D1AO60880 128 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 SFTPBP07988 381 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 MLNP12872 115 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 SERPINB3P29508 390 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 CRABP1P29762 137 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 SLC6A1P30531 599 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 PLTPP55058 493 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 RPS14P62263 151 aaKnown RBP-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 IFI35P80217 286 aaPredicted RBP-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 HSF2Q03933 536 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 VPS26BQ4G0F5 336 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 BMP2KLQ5H9B9 411 aa-2.58□□□□□ -2.82
SNORA40.16-201ENST00000517238 ARMC3Q5W041 872 aa-2.58□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms