RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 YIPF6Q96EC8 236 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 KCNS1Q96KK3 526 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 SAMD8Q96LT4 415 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 FER1L6-AS2Q96M78 137 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 SCLT1Q96NL6 688 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 SERPINB12Q96P63 405 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 GPR21Q99679 349 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 TXNIPQ9H3M7 391 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 MFSD1Q9H3U5 465 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 TMEM27Q9HBJ8 222 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 MORF4L1Q9UBU8 362 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 SLC7A8Q9UHI5 535 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 MEMO1Q9Y316 297 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 AK6Q9Y3D8 172 aaKnown RBP-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 LAMA3Q16787 3333 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 LAMA1P25391 3075 aa-2.31□□□□□ -2.78
RNU6-542P-201ENST00000516405 AKAP13Q12802 2813 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 CCL15-CCL14A0A0B4J2E2 113 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 IGHV1-69DA0A0B4J2H0 117 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TRAPPC13A5PLN9 417 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 RNF222A6NCQ9 220 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 PLPP1O14494 284 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TAAR5O14804 337 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 SHOX2O60902 331 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 BCAS2O75934 225 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 OXSR1O95747 527 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 SERPIND1P05546 499 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ANXA4P09525 319 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 SEC11BP0C7V7 166 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR12D1P0DN82 309 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 BMI1P35226 326 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 SPRR2AP35326 72 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 RBM34P42696 430 aaKnown RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TUFMP49411 452 aaKnown RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 CASP4P49662 377 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 FOXA3P55318 350 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ZNF90Q03938 601 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ATP5G2Q06055 141 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ACTN3Q08043 901 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TMEM267Q0VDI3 215 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 CCL15Q16663 113 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 RILPL1Q5EBL4 403 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 GDF5OSQ5U4N7 250 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 FAM205BPQ63HN1 556 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TRIM40Q6P9F5 258 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 GLIPR1L1Q6UWM5 242 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 PDPNQ86YL7 162 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TBC1D21Q8IYX1 336 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ATOH7Q8N100 152 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 LIX1Q8N485 282 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR8S1Q8NH09 359 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 NDNFQ8TB73 568 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 UFD1Q92890 307 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 S100PBPQ96BU1 408 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 SMARCD1Q96GM5 515 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 RNF2Q99496 336 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TREX2Q9BQ50 279 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 NIPSNAP3BQ9BS92 247 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ZNF471Q9BX82 626 aaPredicted RBP-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 IL22Q9GZX6 179 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 LPAR2Q9HBW0 351 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 PCSK1NQ9UHG2 260 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 CYB5R1Q9UHQ9 305 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 VPS28Q9UK41 221 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 ADAM28Q9UKQ2 775 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 COMMD3-BMI1R4GMX3 469 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 VPS13DQ5THJ4 4388 aa-2.32□□□□□ -2.78
RNU6-542P-201ENST00000516405 TSPAN11A1L157 253 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR52A4PA6NMU1 304 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 F6UB75 175 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 LANCL1O43813 399 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 EIF3GO75821 320 aaKnown RBP eCLIP-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR4F21O95013 312 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 IGHV2-5P01817 119 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 SPNP16150 400 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 PGCP20142 388 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 TEAD1P28347 426 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 CYLC1P35663 651 aaPredicted RBP-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 RND2P52198 227 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 PPP5CP53041 499 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 BST1Q10588 318 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 MOGQ16653 247 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 KYNUQ16719 465 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 TP53I3Q53FA7 332 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR4F3Q6IEY1 312 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR6B2Q6IFH4 312 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 KRT80Q6KB66 452 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 CENPUQ71F23 418 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 GALNTL5Q7Z4T8 443 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 VPS36Q86VN1 386 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 TMEM17Q86X19 198 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 CLECL1Q8IZS7 167 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 GPR26Q8NDV2 337 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR1L6Q8NGR2 347 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR10R2Q8NGX6 335 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 OR4A5Q8NH83 315 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 ST7LQ8TDW4 575 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 C12orf66Q96MD2 445 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 TCEANC2Q96MN5 208 aa-2.33□□□□□ -2.78
RNU6-542P-201ENST00000516405 TTC25Q96NG3 672 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms