RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 COMMD2Q86X83 199 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 BCL6BQ8N143 479 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 FGFRL1Q8N441 504 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 OR1M1Q8NGA1 313 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 OR51E1Q8TCB6 317 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 RPL3LQ92901 407 aaKnown RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 NEIL1Q96FI4 390 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 FAM71F1Q96KD3 344 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 OR8B4Q96RC9 309 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 SLC6A7Q99884 636 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 C19orf24Q9BVV8 132 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 SSBP3Q9BWW4 388 aaPredicted RBP9.59□□□□□ -0.87
VCAN-212ENST00000515397 MROQ9BYG7 248 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 PBOV1Q9GZY1 135 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 ADGRL4Q9HBW9 690 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 FAM206AQ9NX38 181 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 DUX4Q9UBX2 424 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 MIOXQ9UGB7 285 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 AUP1Q9Y679 476 aa9.59□□□□□ -0.87
VCAN-212ENST00000515397 LGALS8O00214 317 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 EBAG9O00559 213 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 EI24O14681 340 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 CDIPTO14735 213 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 ADAM20O43506 726 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 RPP14O95059 124 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 PTBP3O95758 552 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 ZNF12P17014 697 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 RIDAP52758 137 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 ODF4Q2M2E3 257 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 KLF17Q5JT82 389 aaPredicted RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 CEP78Q5JTW2 689 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 NXNL2Q5VZ03 156 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 WDR25Q64LD2 544 aaPredicted RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 KCTD18Q6PI47 426 aaPredicted RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 ZNF841Q6ZN19 808 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 C1QL2Q7Z5L3 287 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 FAM90A1Q86YD7 464 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 ZNF679Q8IYX0 411 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 CBR4Q8N4T8 237 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 SPERTQ8NA61 448 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 OR5T2Q8NGG2 359 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 OR8B3Q8NGG8 313 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 NANPQ8TBE9 248 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 FAM81AQ8TBF8 368 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 LRRC29Q8WV35 223 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 ERGIC1Q969X5 290 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 EME1Q96AY2 570 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 RNF170Q96K19 258 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 TECTBQ96PL2 329 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 OR8B2Q96RD0 313 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 SLC29A1Q99808 456 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 RBM4BQ9BQ04 359 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 PRRG3Q9BZD7 231 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 OPA3Q9H6K4 179 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 NIPAL2Q9H841 368 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 C14orf119Q9NWQ9 140 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 CTSZQ9UBR2 303 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 OR5V1Q9UGF6 321 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 MRM2Q9UI43 246 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 SLC22A13Q9Y226 551 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 NOP16Q9Y3C1 178 aaKnown RBP9.58□□□□□ -0.88
VCAN-212ENST00000515397 INSIG2Q9Y5U4 225 aa9.58□□□□□ -0.88
VCAN-212ENST00000515397 A0A1W2PQL4 384 aaPredicted RBP9.57□□□□□ -0.88
VCAN-212ENST00000515397 OOEPA6NGQ2 149 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 SLC22A31A6NKX4 558 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 C22orf46C9J442 243 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ZNF670-ZNF695F2Z2N8 137 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 J3QLI3 93 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 FCN3O75636 299 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 LHBP01229 141 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ALPLP05186 524 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 CFL1P23528 166 aaKnown RBP9.57□□□□□ -0.88
VCAN-212ENST00000515397 GPM6AP51674 278 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 PAX2Q02962 417 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ROM1Q03395 351 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 LIPNQ5VXI9 398 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 WDR82Q6UXN9 313 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 MOB3CQ70IA8 216 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 CSNK2A3Q8NEV1 391 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 OR10H4Q8NGA5 316 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 SPATA3Q8NHX4 192 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 RAB40AQ8WXH6 277 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ASB17Q8WXJ9 295 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 OR5P3Q8WZ94 311 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 DUX5Q96PT3 197 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 CCL13Q99616 98 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 MICU1Q9BPX6 476 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 GABARAPL3Q9BY60 117 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 WDR13Q9H1Z4 485 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 RGCCQ9H4X1 137 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 SMURF1Q9HCE7 757 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 GPR84Q9NQS5 396 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 SNTG1Q9NSN8 517 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 CLN6Q9NWW5 311 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 CLN8Q9UBY8 286 aa9.57□□□□□ -0.88
VCAN-212ENST00000515397 ZNF69Q9UC07 566 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms