RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 NPTNQ9Y639 398 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 HSPE1-MOB4S4R3N1 261 aa11.77□□□□□ -0.53
USP46-209ENST00000514536 LOC100289279A0A1B0GTE1 492 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 ZNF850A8MQ14 1090 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 P2RY10O00398 339 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 CD5LO43866 347 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 IGHA1P01876 353 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 GRPP07492 148 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 GATA4P43694 442 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 PRDX4Q13162 271 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 GALEQ14376 348 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 MPPED2Q15777 294 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 C6orf52Q5T4I8 152 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 SEMA6DQ8NFY4 1073 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
USP46-209ENST00000514536 ALG8Q9BVK2 526 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 CR1P17927 2039 aa11.76□□□□□ -0.53
USP46-209ENST00000514536 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ISPDA4D126 451 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 H0YJX3 145 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 TMEM178BH3BS89 294 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 IFNL4K9M1U5 179 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MTRF1O75570 445 aaKnown RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 CYB5R3P00387 301 aaPredicted RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 CST4P01036 141 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ATP6V1B1P15313 513 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 GZMKP49863 264 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MZT1Q08AG7 82 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 RIPK1Q13546 671 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 SNCBQ16143 134 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 WDR38Q5JTN6 314 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 FTMTQ8N4E7 242 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 HPS1Q92902 700 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MRPL48Q96GC5 212 aaKnown RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 C4orf36Q96KX1 117 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ZNF649Q9BS31 505 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 FGF20Q9NP95 211 aaPredicted RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 YAE1D1Q9NRH1 226 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 INPP5EQ9NRR6 644 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 C14orf119Q9NWQ9 140 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ERVK13-1Q9NX77 482 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 PIGLQ9Y2B2 252 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MPC1Q9Y5U8 109 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 H3BSH0 61 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 DHRS3O75911 302 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ZNF205O95201 554 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 LMO4P61968 165 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ACTA2P62736 377 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ACTG2P63267 376 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 RIPPLY1Q0D2K3 151 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 LAIR2Q6ISS4 152 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 PRSS35Q8N3Z0 413 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 PLPP7Q8NBV4 271 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 OR11L1Q8NGX0 322 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 OR2G2Q8NGZ5 317 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ERGIC1Q969X5 290 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MSI2Q96DH6 328 aaKnown RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 VCX3BQ9H321 246 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ISG20L2Q9H9L3 353 aaKnown RBP11.75□□□□□ -0.53
USP46-209ENST00000514536 FN3KRPQ9HA64 309 aa11.75□□□□□ -0.53
USP46-209ENST00000514536 ZNF816-ZNF321PA0A0X1KG74 233 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 A6NLC8 198 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 LRRC30A6NM36 301 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ANXA2P2A6NMY6 339 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 PTBP3O95758 552 aaKnown RBP11.74□□□□□ -0.53
USP46-209ENST00000514536 IGHV2-70P01814 119 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 HTR1AP08908 422 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 IRF2P14316 349 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 FAHP16930 419 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ZNF181Q2M3W8 571 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 DMRTC1Q5HYR2 192 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 FAM201AQ5SY85 155 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ZNF826PQ6ZT77 177 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 DOK3Q7L591 496 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 LRRC28Q86X40 367 aaPredicted RBP11.74□□□□□ -0.53
USP46-209ENST00000514536 RDH10Q8IZV5 341 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 OR1M1Q8NGA1 313 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 OR14K1Q8NGZ2 314 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 Q8TCH9 128 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 FBLIM1Q8WUP2 373 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 OR5P3Q8WZ94 311 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 GGHQ92820 318 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 RNF170Q96K19 258 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 HIST1H2AAQ96QV6 131 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 GAL3ST1Q99999 423 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 MICU1Q9BPX6 476 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 C1orf123Q9NWV4 160 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 UBAP1Q9NZ09 502 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 FRRS1LQ9P0K9 344 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 ENPP5Q9UJA9 477 aa11.74□□□□□ -0.53
USP46-209ENST00000514536 DYSFO75923 2080 aa11.73□□□□□ -0.53
USP46-209ENST00000514536 ABCA1O95477 2261 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms