RNA–Protein interactions for RNA: ENST00000514096.5

LIMCH1-219, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-219ENST00000514096 RP2O75695 350 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 LY6HO94772 140 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ADAP00813 363 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 CD79AP11912 226 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 CCL2P13500 99 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 FABP4P15090 132 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 CRHBPP24387 322 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 XAF1Q6GPH4 301 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 TBPL2Q6SJ96 375 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 EIF4E3Q8N5X7 224 aaKnown RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 OR4C5Q8NGB2 326 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 OR9Q1Q8NGQ5 310 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ZNF417Q8TAU3 575 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ISOC2Q96AB3 205 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ZNF587Q96SQ5 575 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 SF3B5Q9BWJ5 86 aaKnown RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 DSCAMO60469 2012 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 A0A0U1RQK1 487 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 M0R1B8 84 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 MPC2O95563 127 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 EPPINO95925 133 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 HLA-DOBP13765 273 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 MUC1P15941 1255 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ZNF43P17038 809 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 RFX2P48378 723 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 MICAQ29983 383 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 CLEC12AQ5QGZ9 265 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 GLT8D1Q68CQ7 371 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 DLEU7Q6UYE1 221 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 LRRTM1Q86UE6 522 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 CXorf67Q86X51 503 aaPredicted RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 PUSL1Q8N0Z8 303 aaKnown RBP6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 OR2D3Q8NGH3 330 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 HPSE2Q8WWQ2 592 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 MOAP1Q96BY2 351 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 C20orf24Q9BUV8 137 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 SRRQ9GZT4 340 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ACKR4Q9NPB9 350 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 SPAG4Q9NPE6 437 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 ISYNA1Q9NPH2 558 aa6.95□□□□□ -1.3
LIMCH1-219ENST00000514096 A0A1W2PPE3 182 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ZNF726A6NNF4 738 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 AHRRA9YTQ3 701 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 AIPO00170 330 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 TNFSF12O43508 249 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HIST1H2ABP04908 130 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HPNP05981 417 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 CPT2P23786 658 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 THBS4P35443 961 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 TFPI2P48307 235 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 CEBPGP53567 150 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 SLC16A1P53985 500 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 OR1Q1Q15612 314 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 SAMD4BQ5PRF9 694 aaKnown RBP6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HIST3H2AQ7L7L0 130 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ADPRHL1Q8NDY3 354 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 PFN4Q8NHR9 129 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 SFXN5Q8TD22 340 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 DYRK2Q92630 601 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HIST1H2ACQ93077 130 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 WFIKKN1Q96NZ8 548 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 OR5M11Q96RB7 305 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 MRI1Q9BV20 369 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 METTL17Q9H7H0 456 aaPredicted RBP6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GPR52Q9Y2T5 361 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HRNRQ86YZ3 2850 aaPredicted RBP6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 TRAV27A0A087WT01 109 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ELOVL7A1L3X0 281 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 KIAA0513O60268 411 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HCN1O60741 890 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GABARAPO95166 117 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 CPN1P15169 458 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 SERPINA2P20848 420 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ADH6P28332 368 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 SELENOPP49908 381 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GFRA1P56159 465 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ENTPD8Q5MY95 495 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 AAED1Q7RTV5 226 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 LDLRAD3Q86YD5 345 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 LAX1Q8IWV1 398 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HS3ST5Q8IZT8 346 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ZCCHC24Q8N2G6 241 aaKnown RBP6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ASB5Q8WWX0 329 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ABHD1Q96SE0 405 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 DDOQ99489 341 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 KCNJ15Q99712 375 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 A0A1W2PNV4 684 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HSPB2A8KAH6 182 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 H3BSH0 61 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ACTL6AO96019 429 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 HEXAP06865 529 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 ZNF708P17019 499 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GRPRP30550 384 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 CDKN1AP38936 164 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 CD200P41217 278 aa6.94□□□□□ -1.3
LIMCH1-219ENST00000514096 GSK3BP49841 420 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms