RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 TNFSF9P41273 254 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CXCL12P48061 93 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CDKN2DP55273 166 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ZNF121P58317 390 aaPredicted RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 SEMG2Q02383 582 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ITGB3BPQ13352 177 aaPredicted RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 GNA13Q14344 377 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ANGPT1Q15389 498 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ZBTB6Q15916 424 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 BCL2A1Q16548 175 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 TPTE2P1Q5T6R2 138 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 FAM173BQ6P4H8 233 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ULK3Q6PHR2 472 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 IGFL1Q6UW32 110 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 SLC35D2Q76EJ3 337 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 SLC16A13Q7RTY0 426 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 NEGR1Q7Z3B1 354 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 APRG1Q8IVJ8 170 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 BOD1L2Q8IYS8 172 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 LGI3Q8N145 548 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 LYPD1Q8N2G4 141 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CBR4Q8N4T8 237 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 JAGN1Q8N5M9 183 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 RNF10Q8N5U6 811 aaKnown RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 RNF182Q8N6D2 247 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 COX18Q8N8Q8 333 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ZNF709Q8N972 641 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 C11orf72Q8NBR9 251 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 NECAP1Q8NC96 275 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR11H7Q8NGC8 314 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR4K5Q8NGD3 323 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR10AD1Q8NGE0 317 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR6Q1Q8NGQ2 317 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR10G6Q8NH81 332 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CDC26Q8NHZ8 85 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 UBA3Q8TBC4 463 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 PHOSPHO2Q8TCD6 241 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 LRRC29Q8WV35 223 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 BAALCQ8WXS3 180 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ESR2Q92731 530 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 APH1AQ96BI3 265 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 L3HYPDHQ96EM0 354 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 COL21A1Q96P44 957 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OPALINQ96PE5 141 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CSPG4P5Q96PW8 444 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 DOK1Q99704 481 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 HSD17B10Q99714 261 aaKnown RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 ANGPTL4Q9BY76 406 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 LCE3DQ9BYE3 92 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ACTR3CQ9C0K3 210 aaPredicted RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 UCK1Q9HA47 277 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 ZDHHC4Q9NPG8 344 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 MED4Q9NPJ6 270 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 OR2S2Q9NQN1 319 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 AGPAT4Q9NRZ5 378 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 MTFP1Q9UDX5 166 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 NXT1Q9UKK6 140 aaKnown RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 TSSC4Q9Y5U2 329 aaPredicted RBP1.31□□□□□ -2.2
RNF4-219ENST00000513450 SAR1BQ9Y6B6 198 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 CAMTA1Q9Y6Y1 1673 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 UNC13AQ9UPW8 1703 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 SBNO1A3KN83 1393 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 TNS2Q63HR2 1409 aa1.31□□□□□ -2.2
RNF4-219ENST00000513450 LRP4O75096 1905 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNFX1Q9P2E3 1918 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 IGLV3-12A0A075B6K2 115 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 TRAV19A0A0A6YYK7 116 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 A0A0J9YXV3 536 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 C1orf232A0A0U1RR37 186 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 A0A1B0GW55 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SLC22A20A6NK97 555 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 NCBP2LA6PVI3 153 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 COLCA2A8K830 154 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 E7EWF7 191 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 MKRN2OSH3BPM6 223 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 KLRC4-KLRK1H3BQV0 150 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 K7EMT4 169 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 M0R3G1 203 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 TOR1AO14656 332 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 ITGB1BP1O14713 200 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SLC9A3R1O14745 358 aaPredicted RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 COCHO43405 550 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 XRCC2O43543 280 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CHMP2AO43633 222 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SLC19A2O60779 497 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 FOXH1O75593 365 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CCNKO75909 580 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SLC22A5O76082 557 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 SMC2O95347 1197 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 CCNE2O96020 404 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 HPRT1P00492 218 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 HLA-HP01893 362 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 HBE1P02100 147 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DCNP07585 359 aaKnown RBP1.3□□□□□ -2.2
RNF4-219ENST00000513450 ZNF688P0C7X2 276 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4L2P0CJ85 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4L3P0CJ86 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4L5P0CJ88 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4L6P0CJ89 424 aa1.3□□□□□ -2.2
RNF4-219ENST00000513450 DUX4L7P0CJ90 424 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms