RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 RPL3LQ92901 407 aaKnown RBP10.72□□□□□ -0.69
PDPN-210ENST00000513143 SYT3Q9BQG1 590 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 CHCHD6Q9BRQ6 235 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 PPIL3Q9H2H8 161 aaKnown RBP10.72□□□□□ -0.69
PDPN-210ENST00000513143 PLEKHA1Q9HB21 404 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 TXNL4BQ9NX01 149 aaKnown RBP10.72□□□□□ -0.69
PDPN-210ENST00000513143 MRPL15Q9P015 296 aaKnown RBP10.72□□□□□ -0.69
PDPN-210ENST00000513143 ENPP5Q9UJA9 477 aa10.72□□□□□ -0.69
PDPN-210ENST00000513143 ARFGEF3Q5TH69 2177 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 A0A1W2PPK0 400 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 A6NIN4 97 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 HS3ST1O14792 307 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 TIMM8AO60220 97 aaPredicted RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 LILRA1O75019 489 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 GABARAPO95166 117 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 ZNF20P17024 532 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 SERPINF1P36955 418 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 EFNB3Q15768 340 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 MOGQ16653 247 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 FAM27D1Q5T7N8 215 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 C22orf42Q6IC83 251 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 ASPHD2Q6ICH7 369 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 UTS2BQ765I0 119 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 CLVS1Q8IUQ0 354 aaPredicted RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 OR5AS1Q8N127 324 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 BHLHE23Q8NDY6 225 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 OR8G5Q8NG78 346 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 OR5D14Q8NGL3 314 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 PP6455Q8WZ26 134 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 PIGTQ969N2 578 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 FBXW5Q969U6 566 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 NAA50Q9GZZ1 169 aaKnown RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 PLK3Q9H4B4 646 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 EXOSC4Q9NPD3 245 aaKnown RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 MYEF2Q9P2K5 600 aaKnown RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 PLEKHB1Q9UF11 243 aaPredicted RBP10.71□□□□□ -0.69
PDPN-210ENST00000513143 GSTK1Q9Y2Q3 226 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 RHBDD3Q9Y3P4 386 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 CEPT1Q9Y6K0 416 aa10.71□□□□□ -0.69
PDPN-210ENST00000513143 LOC100506127A0A0U1RQW1 187 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 A0A1B0GWJ7 208 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 DPPA5A6NC42 116 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 ANKRD30BLA7E2S9 258 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 GMDSO60547 372 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 ARL6IP5O75915 188 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 ALX3O95076 343 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 NRASP01111 189 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 IGFBP3P17936 291 aaPredicted RBP10.7□□□□□ -0.7
PDPN-210ENST00000513143 FSTP19883 344 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 COL8A1P27658 744 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 GNALP38405 381 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 MMP15P51511 669 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 TMBIM6P55061 237 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 TLE4Q04727 773 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 CTF1Q16619 201 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 MST1LQ2TV78 715 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 HSD17B12Q53GQ0 312 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 CLVS2Q5SYC1 327 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 ZNF529Q6P280 563 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 FBXL14Q8N1E6 418 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 UBASH3BQ8TF42 649 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 ORAI1Q96D31 301 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 C14orf79Q96F83 325 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 BCL7BQ9BQE9 202 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 SLC30A2Q9BRI3 323 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 CENPOQ9BU64 300 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 CHST5Q9GZS9 411 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 RBM38Q9H0Z9 239 aaKnown RBP10.7□□□□□ -0.7
PDPN-210ENST00000513143 TMEM100Q9NV29 134 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 TAAR3PQ9P1P4 343 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 CGGBP1Q9UFW8 167 aaPredicted RBP10.7□□□□□ -0.7
PDPN-210ENST00000513143 FOXJ3Q9UPW0 622 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 DCHS2Q6V1P9 2916 aa10.7□□□□□ -0.7
PDPN-210ENST00000513143 SMIM31A0A1B0GVY4 71 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 A0A1W2PPW3 197 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 ANKRD61A6NGH8 418 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 B9A039 149 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 SRMP19623 302 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 CALRP27797 417 aaKnown RBP10.69□□□□□ -0.7
PDPN-210ENST00000513143 PRDX4Q13162 271 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 UBE2V2Q15819 145 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 SWI5Q1ZZU3 235 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 Q6ZR03 302 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 ZNF295-AS1Q8N0V1 137 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 MUC15Q8N387 334 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 ZNF611Q8N823 705 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 ZNF420Q8TAQ5 688 aaPredicted RBP10.69□□□□□ -0.7
PDPN-210ENST00000513143 RAB2BQ8WUD1 216 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 PIGCQ92535 297 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 KCTD7Q96MP8 289 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 TECTBQ96PL2 329 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 PAPOLGQ9BWT3 736 aaKnown RBP10.69□□□□□ -0.7
PDPN-210ENST00000513143 SLC22A4Q9H015 551 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 ZCCHC4Q9H5U6 513 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 RNF167Q9H6Y7 350 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 PPP1R3EQ9H7J1 279 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 CYSLTR2Q9NS75 346 aa10.69□□□□□ -0.7
PDPN-210ENST00000513143 TAS2R4Q9NYW5 299 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms