RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 KIAA1210Q9ULL0 1709 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 TCRBV7S2A1N4TA0A589 114 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SNHG28P0DPA3 235 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 COX5AP20674 150 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 MALP21145 153 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 NME2P22392 152 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 FOXO1Q12778 655 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 MMDQ15546 238 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 MEIG1Q5JSS6 88 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 NCR3LG1Q68D85 454 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR2T2Q6IF00 324 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR4A47Q6IF82 309 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 AMIGO3Q86WK7 504 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 ZNF738Q8NE65 137 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 TSLPQ969D9 159 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR6C3Q9NZP0 311 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 LSM2Q9Y333 95 aaKnown RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 AGLP35573 1532 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 YBX1P67809 324 aaKnown RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 FAM53AQ6NSI3 398 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 OR9Q2Q8NGE9 314 aa8.05□□□□□ -1.12
VCAN-208ENST00000512590 SPACA9Q96E40 222 aaPredicted RBP8.05□□□□□ -1.12
VCAN-208ENST00000512590 PRR19A6NJB7 356 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 RFPL4BQ6ZWI9 263 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 SLC25A26Q70HW3 274 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 DTX2Q86UW9 622 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 VSTM2AQ8TAG5 236 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF480Q8WV37 535 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 RAB40AQ8WXH6 277 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 SLAMF6Q96DU3 332 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ALKBH3Q96Q83 286 aaPredicted RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 LYSMD1Q96S90 227 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 SNURFLB1AK76 121 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 TOX3O15405 576 aaPredicted RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 SSSCA1O60232 199 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 NGFP01138 241 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 SEMG1P04279 462 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 NQO2P16083 231 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 COL9A1P20849 921 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 HTR1DP28221 377 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 MPGP29372 298 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 CCR7P32248 378 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 THBS4P35443 961 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 LIM2P55344 173 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 LYG2Q86SG7 212 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF683Q8IZ20 524 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 TTC9CQ8N5M4 171 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 C8orf46Q8TAG6 207 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ST8SIA1Q92185 356 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 FEVQ99581 238 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 LYRM4Q9HD34 91 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 RNF7Q9UBF6 113 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 KLK11Q9UBX7 282 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 FOXJ3Q9UPW0 622 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF256Q9Y2P7 627 aaPredicted RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 TMEM82A0PJX8 343 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 EEDO75530 441 aaKnown RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 ADAP1O75689 374 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 HOXD4P09016 255 aaPredicted RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 CD1EP15812 388 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ADRA2CP18825 462 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 CA6P23280 308 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 OIT3Q8WWZ8 545 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 DOK1Q99704 481 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 OR2B2Q9GZK3 357 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF665Q9H7R5 613 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 DUOX1Q9NRD9 1551 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 TARM1B6A8C7 271 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 C21orf140B9A014 251 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 H0YIV9 168 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 H3BVH4 76 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 LILRA1O75019 489 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 IL7P13232 177 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 TSPOP30536 169 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 OR2F1Q13607 317 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF841Q6ZN19 808 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ERMP1Q7Z2K6 904 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 MOGAT3Q86VF5 341 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF384Q8TF68 577 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 MVB12AQ96EY5 273 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ZNF416Q9BWM5 594 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ASCL3Q9NQ33 180 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 CISD1Q9NZ45 108 aaKnown RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 HILPDAQ9Y5L2 63 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 PPRC1Q5VV67 1664 aaKnown RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 ISLRO14498 428 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 NPFFO15130 113 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ICOSLGO75144 302 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 ACAA1P09110 424 aaPredicted RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 FAM87AP0C7U9 286 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 TAGLN2P37802 199 aaKnown RBP8.04□□□□□ -1.12
VCAN-208ENST00000512590 REEP5Q00765 189 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 FZD2Q14332 565 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 CD226Q15762 336 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 LETMD1Q6P1Q0 360 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 DYRK2Q92630 601 aa8.04□□□□□ -1.12
VCAN-208ENST00000512590 SLC52A3Q9NQ40 469 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms